Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0133 and DvMF_0134 are separated by 206 nucleotides DvMF_0134 and DvMF_0135 are separated by 113 nucleotides DvMF_0135 and DvMF_0136 overlap by 1 nucleotides
DvMF_0133: DvMF_0133 - Methyltransferase type 11 (RefSeq), at 148,839 to 149,576
_0133
DvMF_0134: DvMF_0134 - hypothetical protein (RefSeq), at 149,783 to 150,322
_0134
DvMF_0135: DvMF_0135 - Haloacid dehalogenase domain protein hydrolase (RefSeq), at 150,436 to 151,254
_0135
DvMF_0136: DvMF_0136 - hypothetical protein (RefSeq), at 151,254 to 152,498
_0136
Position (kb) 150
151
152 Strain fitness (log2 ratio) -1
0
1 at 149.743 kb on + strand at 149.845 kb on - strand, within DvMF_0134 at 149.935 kb on + strand, within DvMF_0134 at 149.942 kb on + strand, within DvMF_0134 at 149.943 kb on - strand, within DvMF_0134 at 150.050 kb on + strand, within DvMF_0134 at 150.215 kb on - strand, within DvMF_0134 at 150.362 kb on - strand at 150.410 kb on - strand at 150.426 kb on + strand at 150.545 kb on - strand, within DvMF_0135 at 150.705 kb on - strand, within DvMF_0135 at 150.801 kb on + strand, within DvMF_0135 at 151.032 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.045 kb on + strand, within DvMF_0135 at 151.334 kb on - strand at 151.433 kb on - strand, within DvMF_0136 at 151.500 kb on - strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.521 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.561 kb on + strand, within DvMF_0136 at 151.588 kb on - strand, within DvMF_0136 at 151.593 kb on + strand, within DvMF_0136 at 151.717 kb on - strand, within DvMF_0136 at 151.758 kb on - strand, within DvMF_0136 at 151.776 kb on - strand, within DvMF_0136 at 151.863 kb on - strand, within DvMF_0136 at 152.025 kb on + strand, within DvMF_0136 at 152.119 kb on - strand, within DvMF_0136 at 152.129 kb on - strand, within DvMF_0136
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 149,743 + -0.5 149,845 - DvMF_0134 0.11 -0.8 149,935 + DvMF_0134 0.28 -0.4 149,942 + DvMF_0134 0.29 -0.2 149,943 - DvMF_0134 0.30 -0.4 150,050 + DvMF_0134 0.49 -0.0 150,215 - DvMF_0134 0.80 -0.6 150,362 - +0.0 150,410 - -0.3 150,426 + -0.4 150,545 - DvMF_0135 0.13 -0.5 150,705 - DvMF_0135 0.33 +0.2 150,801 + DvMF_0135 0.45 -1.1 151,032 + DvMF_0135 0.73 -0.0 151,045 + DvMF_0135 0.74 -0.7 151,045 + DvMF_0135 0.74 -0.1 151,334 - +0.1 151,433 - DvMF_0136 0.14 -0.5 151,500 - DvMF_0136 0.20 -0.2 151,521 + DvMF_0136 0.21 -0.1 151,521 + DvMF_0136 0.21 -0.0 151,561 + DvMF_0136 0.25 -0.2 151,561 + DvMF_0136 0.25 +0.4 151,588 - DvMF_0136 0.27 -0.0 151,593 + DvMF_0136 0.27 -0.2 151,717 - DvMF_0136 0.37 -0.3 151,758 - DvMF_0136 0.40 -0.5 151,776 - DvMF_0136 0.42 +0.0 151,863 - DvMF_0136 0.49 -0.1 152,025 + DvMF_0136 0.62 -0.2 152,119 - DvMF_0136 0.69 -0.7 152,129 - DvMF_0136 0.70 -0.2
Or see this region's nucleotide sequence