Experiment: Pyruvate-Sulfate (60-15mM) with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF26503 and DVU0243 are separated by 29 nucleotides DVU0243 and DVU0244 are separated by 59 nucleotides DVU0244 and DVU0245 are separated by 29 nucleotides
DORF26503: DORF26503 - no description, at 274,761 to 275,414
DORF26503
DVU0243: DVU0243 - lipoprotein, putative (TIGR), at 275,444 to 276,112
DVU0243
DVU0244: DVU0244 - hypothetical protein (TIGR), at 276,172 to 277,029
DVU0244
DVU0245: DVU0245 - protein phosphatase, putative (TIGR), at 277,059 to 278,168
DVU0245
Position (kb) 275
276
277 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 274.485 kb on - strand at 274.624 kb on + strand at 274.833 kb on + strand, within DORF26503 at 274.868 kb on + strand, within DORF26503 at 274.874 kb on + strand, within DORF26503 at 274.876 kb on - strand, within DORF26503 at 274.972 kb on - strand, within DORF26503 at 275.074 kb on - strand, within DORF26503 at 275.104 kb on - strand, within DORF26503 at 275.145 kb on - strand, within DORF26503 at 275.145 kb on - strand, within DORF26503 at 275.374 kb on + strand at 275.454 kb on + strand at 275.462 kb on - strand at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.523 kb on - strand, within DVU0243 at 275.573 kb on - strand, within DVU0243 at 275.592 kb on - strand, within DVU0243 at 275.592 kb on - strand, within DVU0243 at 275.594 kb on + strand, within DVU0243 at 275.645 kb on + strand, within DVU0243 at 275.647 kb on + strand, within DVU0243 at 275.655 kb on + strand, within DVU0243 at 275.694 kb on - strand, within DVU0243 at 275.710 kb on + strand, within DVU0243 at 275.718 kb on - strand, within DVU0243 at 275.723 kb on - strand, within DVU0243 at 275.731 kb on - strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.738 kb on + strand, within DVU0243 at 275.774 kb on - strand, within DVU0243 at 275.816 kb on - strand, within DVU0243 at 275.877 kb on + strand, within DVU0243 at 276.019 kb on + strand, within DVU0243 at 276.027 kb on - strand, within DVU0243 at 276.027 kb on - strand, within DVU0243 at 276.058 kb on - strand at 276.094 kb on + strand at 276.114 kb on + strand at 276.198 kb on + strand at 276.213 kb on + strand at 276.231 kb on - strand at 276.262 kb on + strand, within DVU0244 at 276.270 kb on - strand, within DVU0244 at 276.275 kb on - strand, within DVU0244 at 276.298 kb on + strand, within DVU0244 at 276.516 kb on - strand, within DVU0244 at 276.556 kb on - strand, within DVU0244 at 276.568 kb on - strand, within DVU0244 at 276.573 kb on - strand, within DVU0244 at 276.601 kb on - strand, within DVU0244 at 276.614 kb on - strand, within DVU0244 at 276.748 kb on + strand, within DVU0244 at 276.775 kb on + strand, within DVU0244 at 276.969 kb on + strand at 277.044 kb on - strand at 277.057 kb on + strand at 277.065 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Aluminum 1mM remove 274,485 - -0.9 274,624 + -0.9 274,833 + DORF26503 0.11 -1.0 274,868 + DORF26503 0.16 -1.0 274,874 + DORF26503 0.17 +1.1 274,876 - DORF26503 0.18 -2.0 274,972 - DORF26503 0.32 -0.0 275,074 - DORF26503 0.48 -0.2 275,104 - DORF26503 0.52 +0.9 275,145 - DORF26503 0.59 -0.7 275,145 - DORF26503 0.59 +0.4 275,374 + -0.6 275,454 + -1.4 275,462 - +0.9 275,523 - DVU0243 0.12 -1.2 275,523 - DVU0243 0.12 -0.4 275,523 - DVU0243 0.12 -0.4 275,523 - DVU0243 0.12 +0.3 275,573 - DVU0243 0.19 +0.7 275,592 - DVU0243 0.22 -0.3 275,592 - DVU0243 0.22 -0.4 275,594 + DVU0243 0.22 -0.4 275,645 + DVU0243 0.30 -0.4 275,647 + DVU0243 0.30 +0.9 275,655 + DVU0243 0.32 -1.9 275,694 - DVU0243 0.37 -1.0 275,710 + DVU0243 0.40 +0.2 275,718 - DVU0243 0.41 -0.3 275,723 - DVU0243 0.42 +0.2 275,731 - DVU0243 0.43 -1.0 275,738 + DVU0243 0.44 +1.3 275,738 + DVU0243 0.44 -0.3 275,738 + DVU0243 0.44 -0.4 275,738 + DVU0243 0.44 -0.3 275,774 - DVU0243 0.49 +3.1 275,816 - DVU0243 0.56 +0.1 275,877 + DVU0243 0.65 -0.9 276,019 + DVU0243 0.86 +0.1 276,027 - DVU0243 0.87 +1.0 276,027 - DVU0243 0.87 +0.9 276,058 - +0.2 276,094 + -1.5 276,114 + +0.1 276,198 + +0.9 276,213 + -0.4 276,231 - -0.2 276,262 + DVU0244 0.10 +0.3 276,270 - DVU0244 0.11 +0.1 276,275 - DVU0244 0.12 -3.6 276,298 + DVU0244 0.15 -1.3 276,516 - DVU0244 0.40 -0.8 276,556 - DVU0244 0.45 -0.8 276,568 - DVU0244 0.46 -0.9 276,573 - DVU0244 0.47 -1.2 276,601 - DVU0244 0.50 -0.7 276,614 - DVU0244 0.52 -0.0 276,748 + DVU0244 0.67 -0.3 276,775 + DVU0244 0.70 -0.3 276,969 + -0.8 277,044 - +2.1 277,057 + +0.6 277,065 - -0.7
Or see this region's nucleotide sequence