Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4648

Experiment: Sisomicin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.0008 mg/ml
5,377,255	+		Pf6N2E2_4647	0.30	+0.0
5,377,255	+		Pf6N2E2_4647	0.30	-2.1
5,377,255	+		Pf6N2E2_4647	0.30	+0.7
5,377,255	+		Pf6N2E2_4647	0.30	-0.3
5,377,256	-		Pf6N2E2_4647	0.30	+0.6
5,377,256	-		Pf6N2E2_4647	0.30	-0.4
5,377,256	-		Pf6N2E2_4647	0.30	+0.7
5,377,256	-		Pf6N2E2_4647	0.30	-1.1
5,377,256	-		Pf6N2E2_4647	0.30	+0.1
5,377,286	+		Pf6N2E2_4647	0.33	-0.3
5,377,287	-		Pf6N2E2_4647	0.33	-0.7
5,377,287	-		Pf6N2E2_4647	0.33	+0.2
5,377,555	+		Pf6N2E2_4647	0.55	-0.7
5,377,615	+		Pf6N2E2_4647	0.60	+0.0
5,377,615	+		Pf6N2E2_4647	0.60	-0.4
5,377,616	-		Pf6N2E2_4647	0.61	-0.6
5,377,616	-		Pf6N2E2_4647	0.61	-0.2
5,377,616	-		Pf6N2E2_4647	0.61	+1.1
5,377,660	+		Pf6N2E2_4647	0.64	-0.7
5,377,660	+		Pf6N2E2_4647	0.64	+0.7
5,377,660	+		Pf6N2E2_4647	0.64	+0.9
5,377,660	+		Pf6N2E2_4647	0.64	-0.2
5,377,661	-		Pf6N2E2_4647	0.64	+0.8
5,377,717	+		Pf6N2E2_4647	0.69	+0.2
5,377,717	+		Pf6N2E2_4647	0.69	+0.8
5,377,717	+		Pf6N2E2_4647	0.69	+0.7
5,377,718	-		Pf6N2E2_4647	0.69	+0.0
5,377,768	+		Pf6N2E2_4647	0.73	+0.4
5,377,769	-		Pf6N2E2_4647	0.73	+0.3
5,377,769	-		Pf6N2E2_4647	0.73	-0.8
5,377,800	+		Pf6N2E2_4647	0.76	+1.7
5,377,800	+		Pf6N2E2_4647	0.76	-2.3
5,377,801	-		Pf6N2E2_4647	0.76	-0.7
5,377,801	-		Pf6N2E2_4647	0.76	-0.4
5,377,801	-		Pf6N2E2_4647	0.76	-1.3
5,377,801	-		Pf6N2E2_4647	0.76	+0.1
5,377,960	+		Pf6N2E2_4647	0.89	-1.1
5,377,960	+		Pf6N2E2_4647	0.89	+0.7
5,377,960	+		Pf6N2E2_4647	0.89	-0.7
5,377,960	+		Pf6N2E2_4647	0.89	-0.4
5,377,960	+		Pf6N2E2_4647	0.89	-0.1
5,377,961	-		Pf6N2E2_4647	0.90	+0.6
5,377,961	-		Pf6N2E2_4647	0.90	+0.4
5,377,961	-		Pf6N2E2_4647	0.90	-0.1
5,377,961	-		Pf6N2E2_4647	0.90	-0.6
5,377,961	-		Pf6N2E2_4647	0.90	+0.9
5,377,961	-		Pf6N2E2_4647	0.90	+1.6
5,377,961	-		Pf6N2E2_4647	0.90	-0.9
5,377,961	-		Pf6N2E2_4647	0.90	-0.9
5,378,038	-				+0.2
5,378,147	+				-0.4
5,378,180	+				+0.4
5,378,180	+				+1.4
5,378,181	-				+1.1
5,378,181	-				+1.0
5,378,183	+				+0.3
5,378,184	-				-0.5
5,378,219	+				+0.1
5,378,578	+		Pf6N2E2_4648	0.80	-0.7
5,378,578	+		Pf6N2E2_4648	0.80	+0.6
5,378,578	+		Pf6N2E2_4648	0.80	+1.6
5,378,579	-		Pf6N2E2_4648	0.81	-0.4
5,378,579	-		Pf6N2E2_4648	0.81	+0.6
5,378,579	-		Pf6N2E2_4648	0.81	+0.2
5,378,590	+		Pf6N2E2_4648	0.83	+1.6
5,378,590	+		Pf6N2E2_4648	0.83	-0.7
5,378,591	-		Pf6N2E2_4648	0.83	+0.2
5,378,591	-		Pf6N2E2_4648	0.83	+2.2
5,378,591	-		Pf6N2E2_4648	0.83	-0.4
5,378,591	-		Pf6N2E2_4648	0.83	+1.6
5,378,591	-		Pf6N2E2_4648	0.83	-0.6
5,378,640	+				+0.3
5,378,640	+				+0.1
5,378,641	-				+0.6
5,378,641	-				-0.2
5,378,725	+				+1.6
5,378,725	+				+0.2
5,378,726	-				+0.4
5,379,084	+				+0.9
5,379,084	+				+0.7
5,379,084	+				+1.5
5,379,084	+				+0.1
5,379,084	+				+0.9
5,379,084	+				+1.6
5,379,084	+				+1.1
5,379,085	-				+0.3
5,379,085	-				+1.4
5,379,085	-				+0.0
5,379,085	-				+1.1
5,379,119	+				+0.3
5,379,119	+				+1.3
5,379,120	-				+0.6
5,379,120	-				+0.6
5,379,152	-				-0.9
5,379,237	+				+0.3
5,379,237	+				-0.3
5,379,237	+				+1.7
5,379,238	-				+0.3
5,379,238	-				-1.1
5,379,238	-				-0.7
5,379,238	-				+0.2
5,379,238	-				-1.1
5,379,238	-				-0.4
5,379,240	+				+1.0
5,379,240	+				+0.6
5,379,240	+				+1.0
5,379,240	+				+1.5
5,379,240	+				-0.1
5,379,240	+				+0.6
5,379,240	+				+0.5
5,379,240	+				+1.5
5,379,240	+				+0.1
5,379,240	+				+0.7
5,379,241	-				+0.6
5,379,241	-				+0.5
5,379,241	-				-1.4
5,379,241	-				+0.2
5,379,241	-				-0.3
5,379,241	-				-2.5
5,379,241	-				+0.1
5,379,258	+				+0.8
5,379,259	-				-0.5
5,379,494	+		Pf6N2E2_4650	0.17	+0.2
5,379,494	+		Pf6N2E2_4650	0.17	+1.1
5,379,495	-		Pf6N2E2_4650	0.17	+0.1
5,379,498	-		Pf6N2E2_4650	0.17	-0.9
5,379,498	-		Pf6N2E2_4650	0.17	-0.7
5,379,498	-		Pf6N2E2_4650	0.17	-1.1