Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1193

Experiment: Sisomicin 0.0008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.0008 mg/ml
1,395,161	+				+0.1
1,395,161	+				-1.2
1,395,161	+				+0.4
1,395,162	-				+0.9
1,395,162	-				-0.2
1,395,162	-				+0.4
1,395,175	+				+0.3
1,395,176	-				+2.0
1,395,185	+				-0.7
1,395,186	-				+0.4
1,395,186	-				-0.1
1,395,186	-				+0.7
1,395,837	+		Pf6N2E2_1192	0.20	+0.1
1,395,837	+		Pf6N2E2_1192	0.20	+0.8
1,395,838	-		Pf6N2E2_1192	0.20	+0.3
1,395,838	-		Pf6N2E2_1192	0.20	-0.4
1,395,906	+		Pf6N2E2_1192	0.50	+0.4
1,395,906	+		Pf6N2E2_1192	0.50	+0.2
1,395,906	+				-0.9
1,395,906	+		Pf6N2E2_1192	0.50	-0.1
1,395,906	+		Pf6N2E2_1192	0.50	+1.8
1,395,907	-		Pf6N2E2_1192	0.50	-0.4
1,395,907	-		Pf6N2E2_1192	0.50	-0.4
1,395,907	-		Pf6N2E2_1192	0.50	+1.6
1,395,907	-		Pf6N2E2_1192	0.50	-0.8
1,395,993	+		Pf6N2E2_1192	0.88	+0.1
1,395,993	+		Pf6N2E2_1192	0.88	-0.1
1,396,000	+				-0.7
1,396,000	+				-0.5
1,396,104	+				-0.1
1,396,104	+				-0.3
1,396,105	-				+2.1
1,396,105	-				-0.8
1,396,105	-				-1.5
1,396,111	-				-1.1
1,396,158	+				+1.2
1,396,158	+				-0.7
1,396,220	+		Pf6N2E2_1193	0.28	-0.7
1,396,220	+		Pf6N2E2_1193	0.28	+0.1
1,396,233	+		Pf6N2E2_1193	0.34	-0.9
1,396,233	+		Pf6N2E2_1193	0.34	-1.6
1,396,233	+		Pf6N2E2_1193	0.34	-0.4
1,396,234	-		Pf6N2E2_1193	0.34	-0.4
1,396,303	+		Pf6N2E2_1193	0.64	-0.5
1,396,328	+		Pf6N2E2_1193	0.75	+0.4
1,396,329	-		Pf6N2E2_1193	0.75	-1.4
1,396,329	-		Pf6N2E2_1193	0.75	-2.5
1,396,329	-		Pf6N2E2_1193	0.75	+0.1
1,396,352	-		Pf6N2E2_1193	0.85	-0.2
1,396,395	-				-0.5
1,396,395	-				+0.4
1,396,437	-				+0.4
1,396,509	+				+1.2
1,396,529	+				-0.9
1,396,614	-		Pf6N2E2_1194	0.18	-0.3
1,396,753	-		Pf6N2E2_1194	0.33	+0.2
1,396,798	+		Pf6N2E2_1194	0.38	+0.4
1,396,798	+		Pf6N2E2_1194	0.38	+0.9
1,396,799	-		Pf6N2E2_1194	0.38	+0.1
1,396,807	-		Pf6N2E2_1194	0.39	+0.5
1,396,894	+		Pf6N2E2_1194	0.48	-0.0
1,396,895	-		Pf6N2E2_1194	0.48	-0.4
1,396,895	-		Pf6N2E2_1194	0.48	-0.8
1,396,928	-		Pf6N2E2_1194	0.51	+0.3
1,397,006	-		Pf6N2E2_1194	0.60	-1.7
1,397,006	-		Pf6N2E2_1194	0.60	-1.3
1,397,006	-		Pf6N2E2_1194	0.60	+0.4
1,397,029	-		Pf6N2E2_1194	0.62	+1.1
1,397,167	-		Pf6N2E2_1194	0.77	-0.6
1,397,223	+		Pf6N2E2_1194	0.83	-0.2
1,397,223	+		Pf6N2E2_1194	0.83	-1.5
1,397,223	+		Pf6N2E2_1194	0.83	+0.5
1,397,383	-				+0.8