Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21325 and HSERO_RS21330 are separated by 101 nucleotides HSERO_RS21330 and HSERO_RS21335 are separated by 19 nucleotides HSERO_RS21335 and HSERO_RS21340 are separated by 237 nucleotides HSERO_RS21340 and HSERO_RS21345 are separated by 82 nucleotides HSERO_RS21345 and HSERO_RS21350 are separated by 1 nucleotides
HSERO_RS21325: HSERO_RS21325 - membrane protein, at 4,883,592 to 4,884,731
_RS21325
HSERO_RS21330: HSERO_RS21330 - XRE family transcriptional regulator, at 4,884,833 to 4,885,108
_RS21330
HSERO_RS21335: HSERO_RS21335 - hypothetical protein, at 4,885,128 to 4,885,406
_RS21335
HSERO_RS21340: HSERO_RS21340 - septum formation inhibitor protein, at 4,885,644 to 4,886,438
_RS21340
HSERO_RS21345: HSERO_RS21345 - cell division inhibitor MinD, at 4,886,521 to 4,887,336
_RS21345
HSERO_RS21350: HSERO_RS21350 - cell division topological specificity factor MinE, at 4,887,338 to 4,887,607
_RS21350
Position (kb) 4885
4886
4887 Strain fitness (log2 ratio) -2
-1
0
1 at 4884.656 kb on - strand at 4885.230 kb on - strand, within HSERO_RS21335 at 4885.334 kb on - strand, within HSERO_RS21335 at 4885.334 kb on - strand, within HSERO_RS21335 at 4885.374 kb on + strand, within HSERO_RS21335 at 4885.519 kb on - strand at 4885.796 kb on + strand, within HSERO_RS21340 at 4885.862 kb on + strand, within HSERO_RS21340 at 4885.870 kb on - strand, within HSERO_RS21340 at 4885.919 kb on - strand, within HSERO_RS21340 at 4886.483 kb on + strand at 4886.495 kb on + strand at 4886.654 kb on + strand, within HSERO_RS21345 at 4886.695 kb on + strand, within HSERO_RS21345 at 4886.732 kb on + strand, within HSERO_RS21345 at 4886.951 kb on + strand, within HSERO_RS21345
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 4,884,656 - +0.3 4,885,230 - HSERO_RS21335 0.37 -0.2 4,885,334 - HSERO_RS21335 0.74 -0.1 4,885,334 - HSERO_RS21335 0.74 +0.0 4,885,374 + HSERO_RS21335 0.88 -0.2 4,885,519 - -0.0 4,885,796 + HSERO_RS21340 0.19 -2.7 4,885,862 + HSERO_RS21340 0.27 -2.3 4,885,870 - HSERO_RS21340 0.28 -1.8 4,885,919 - HSERO_RS21340 0.35 -1.6 4,886,483 + -0.8 4,886,495 + -0.9 4,886,654 + HSERO_RS21345 0.16 -0.2 4,886,695 + HSERO_RS21345 0.21 -1.4 4,886,732 + HSERO_RS21345 0.26 -2.5 4,886,951 + HSERO_RS21345 0.53 -2.3
Or see this region's nucleotide sequence