Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS17760 and HSERO_RS17765 are separated by 133 nucleotides HSERO_RS17765 and HSERO_RS17770 overlap by 1 nucleotides HSERO_RS17770 and HSERO_RS17775 are separated by 4 nucleotides
HSERO_RS17760: HSERO_RS17760 - mechanosensitive ion channel protein MscS, at 4,081,387 to 4,082,217
_RS17760
HSERO_RS17765: HSERO_RS17765 - coproporphyrinogen III oxidase, at 4,082,351 to 4,083,271
_RS17765
HSERO_RS17770: HSERO_RS17770 - nicotinate-nucleotide adenylyltransferase, at 4,083,271 to 4,083,936
_RS17770
HSERO_RS17775: HSERO_RS17775 - hypothetical protein, at 4,083,941 to 4,084,711
_RS17775
Position (kb) 4082
4083
4084 Strain fitness (log2 ratio) -1
0
1 at 4081.439 kb on + strand at 4081.616 kb on + strand, within HSERO_RS17760 at 4081.681 kb on - strand, within HSERO_RS17760 at 4081.681 kb on - strand, within HSERO_RS17760 at 4081.756 kb on - strand, within HSERO_RS17760 at 4081.785 kb on + strand, within HSERO_RS17760 at 4081.952 kb on + strand, within HSERO_RS17760 at 4082.054 kb on + strand, within HSERO_RS17760 at 4082.106 kb on + strand, within HSERO_RS17760 at 4082.152 kb on - strand at 4082.228 kb on + strand at 4082.300 kb on - strand at 4082.389 kb on + strand at 4083.291 kb on + strand at 4083.543 kb on - strand, within HSERO_RS17770 at 4083.606 kb on - strand, within HSERO_RS17770 at 4083.672 kb on + strand, within HSERO_RS17770 at 4083.750 kb on + strand, within HSERO_RS17770 at 4083.795 kb on + strand, within HSERO_RS17770 at 4083.888 kb on + strand at 4084.204 kb on - strand, within HSERO_RS17775
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 4,081,439 + -0.0 4,081,616 + HSERO_RS17760 0.28 +0.5 4,081,681 - HSERO_RS17760 0.35 -0.3 4,081,681 - HSERO_RS17760 0.35 -0.8 4,081,756 - HSERO_RS17760 0.44 -0.2 4,081,785 + HSERO_RS17760 0.48 -0.6 4,081,952 + HSERO_RS17760 0.68 +0.2 4,082,054 + HSERO_RS17760 0.80 -0.2 4,082,106 + HSERO_RS17760 0.87 +0.1 4,082,152 - -0.7 4,082,228 + +0.2 4,082,300 - +0.3 4,082,389 + -0.5 4,083,291 + -1.0 4,083,543 - HSERO_RS17770 0.41 -0.3 4,083,606 - HSERO_RS17770 0.50 -1.7 4,083,672 + HSERO_RS17770 0.60 -0.6 4,083,750 + HSERO_RS17770 0.72 -1.0 4,083,795 + HSERO_RS17770 0.79 -0.6 4,083,888 + -0.9 4,084,204 - HSERO_RS17775 0.34 -0.3
Or see this region's nucleotide sequence