Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02839

Experiment: PYE 0.5x 25C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep2 28 days
2,990,307	+		CCNA_02837	0.49	-1.5
2,990,308	-		CCNA_02837	0.49	+1.8
2,990,407	+		CCNA_02837	0.67	+2.2
2,990,407	+		CCNA_02837	0.67	-1.7
2,990,407	+		CCNA_02837	0.67	-0.3
2,990,407	+				+0.2
2,990,407	+		CCNA_02837	0.67	-2.6
2,990,407	+		CCNA_02837	0.67	+2.2
2,990,415	-		CCNA_02837	0.68	+0.0
2,990,415	-		CCNA_02837	0.68	-1.1
2,990,429	+		CCNA_02837	0.71	-1.0
2,990,452	+		CCNA_02837	0.75	-3.1
2,990,470	-		CCNA_02837	0.78	+2.9
2,990,476	+		CCNA_02837	0.79	-0.4
2,990,507	+		CCNA_02837	0.84	+2.2
2,990,507	+		CCNA_02837	0.84	+1.2
2,990,515	-		CCNA_02837	0.86	+0.8
2,990,524	-		CCNA_02837	0.88	+0.2
2,990,526	+		CCNA_02837	0.88	-0.4
2,990,566	+				+0.9
2,990,588	+				+2.2
2,990,596	-				-2.1
2,990,617	-				-0.3
2,990,645	+				+1.2
2,990,645	+				+0.4
2,990,645	+				-0.6
2,990,651	+				-0.0
2,990,653	-				+0.2
2,990,653	-				-0.8
2,990,653	-				+0.6
2,990,693	+		CCNA_02838	0.18	+1.0
2,990,752	+		CCNA_02838	0.33	-0.1
2,990,760	-		CCNA_02838	0.35	-0.2
2,990,760	-		CCNA_02838	0.35	-1.0
2,990,762	+		CCNA_02838	0.35	+0.9
2,990,770	-		CCNA_02838	0.37	-0.0
2,990,783	+		CCNA_02838	0.41	-0.8
2,990,801	+		CCNA_02838	0.45	+0.8
2,990,801	+		CCNA_02838	0.45	+0.8
2,990,809	-		CCNA_02838	0.47	-1.4
2,990,838	-		CCNA_02838	0.54	+1.3
2,990,921	+		CCNA_02838	0.75	-0.1
2,990,921	+		CCNA_02838	0.75	+0.5
2,990,921	+		CCNA_02838	0.75	-2.2
2,990,921	+		CCNA_02838	0.75	-1.7
2,990,925	+		CCNA_02838	0.76	-1.7
2,990,931	+		CCNA_02838	0.77	-1.0
2,990,931	+		CCNA_02838	0.77	-2.1
2,990,931	+		CCNA_02838	0.77	-0.9
2,990,931	+		CCNA_02838	0.77	+1.2
2,990,931	+		CCNA_02838	0.77	-1.6
2,990,931	+		CCNA_02838	0.77	+1.2
2,990,931	+		CCNA_02838	0.77	-1.6
2,990,931	+		CCNA_02838	0.77	-2.3
2,990,931	+		CCNA_02838	0.77	+1.6
2,990,931	+		CCNA_02838	0.77	+2.0
2,990,937	+		CCNA_02838	0.79	+1.2
2,990,939	-		CCNA_02838	0.79	+3.8
2,990,939	-		CCNA_02838	0.79	+2.6
2,990,939	-		CCNA_02838	0.79	-1.4
2,990,939	-		CCNA_02838	0.79	+1.0
2,990,939	-		CCNA_02838	0.79	+0.1
2,990,939	-		CCNA_02838	0.79	-0.9
2,990,939	-		CCNA_02838	0.79	-1.3
2,990,939	-		CCNA_02838	0.79	-0.8
2,990,939	-		CCNA_02838	0.79	+0.8
2,990,939	-		CCNA_02838	0.79	-1.6
2,990,939	-		CCNA_02838	0.79	-0.4
2,990,964	+		CCNA_02838	0.86	-0.3
2,990,965	+		CCNA_02838	0.86	+1.2
2,990,965	+		CCNA_02838	0.86	-0.1
2,990,973	-		CCNA_02838	0.88	-0.0
2,990,983	+				-2.4
2,990,991	+				-1.1
2,991,011	+				+2.2
2,991,019	-				+1.2
2,991,019	-				-0.2
2,991,032	-				+0.5
2,991,036	+				-1.4
2,991,053	-				-0.9
2,991,058	-				+2.0
2,991,131	+				-0.2
2,991,139	-				-2.4
2,991,174	+				+2.4
2,991,188	-				-0.6
2,991,215	+				-0.1
2,991,223	-				-1.3
2,991,237	+				+1.2
2,991,237	+				-0.6
2,991,245	-				-0.3
2,991,245	-				+1.1
2,991,245	-				+0.3
2,991,275	+				-0.4
2,991,275	+				-3.1
2,991,275	+				-2.0
2,991,283	-				-2.0
2,991,283	-				+1.6
2,991,283	-				-1.0
2,991,283	-				+0.5
2,991,283	-				-3.4
2,991,285	+				-1.1
2,991,305	-				+1.6
2,991,305	-				+1.8
2,991,339	+				-0.4
2,991,347	-				-0.5
2,991,355	+				-0.6
2,991,377	-				+1.2
2,991,459	+				+2.2
2,991,467	-				+2.2
2,991,467	-				+0.6
2,991,467	-				-1.7
2,991,467	-				+1.6
2,991,467	-				-0.1
2,991,472	+				-1.6
2,991,510	-				-0.1
2,991,548	-				-0.1
2,991,675	-				+0.2
2,991,678	+		CCNA_02839	0.13	+0.6
2,991,743	-		CCNA_02839	0.15	-2.1
2,991,788	-		CCNA_02839	0.17	-2.1
2,991,794	-		CCNA_02839	0.17	-1.4
2,991,820	-		CCNA_02839	0.18	-0.1
2,991,841	-		CCNA_02839	0.19	-1.6
2,991,967	-		CCNA_02839	0.23	+0.5
2,992,000	+		CCNA_02839	0.24	+1.2
2,992,080	-		CCNA_02839	0.27	-1.5
2,992,133	-		CCNA_02839	0.29	-1.4
2,992,231	+		CCNA_02839	0.32	+1.2
2,992,285	-		CCNA_02839	0.34	-3.1
2,992,349	-		CCNA_02839	0.36	-0.8
2,992,357	-		CCNA_02839	0.37	-3.6
2,992,398	-		CCNA_02839	0.38	+0.6
2,992,413	+		CCNA_02839	0.39	+0.6
2,992,478	-		CCNA_02839	0.41	-3.0
2,992,489	+		CCNA_02839	0.41	-1.0
2,992,497	-		CCNA_02839	0.42	-0.5
2,992,513	+		CCNA_02839	0.42	-1.5
2,992,536	+		CCNA_02839	0.43	+1.2
2,992,544	-		CCNA_02839	0.43	+0.2
2,992,551	-		CCNA_02839	0.44	-2.1
2,992,579	-		CCNA_02839	0.44	-0.6
2,992,585	-		CCNA_02839	0.45	-3.4
2,992,610	+		CCNA_02839	0.46	-1.6
2,992,650	-		CCNA_02839	0.47	-0.1
2,992,676	-		CCNA_02839	0.48	-2.3
2,992,730	+		CCNA_02839	0.50	-0.8
2,992,732	-		CCNA_02839	0.50	-0.8
2,992,746	-		CCNA_02839	0.50	-1.4
2,992,778	+		CCNA_02839	0.51	-0.1
2,992,822	-		CCNA_02839	0.53	-0.1
2,992,854	-		CCNA_02839	0.54	-0.6
2,992,856	+		CCNA_02839	0.54	-2.1
2,992,864	-		CCNA_02839	0.54	+0.3
2,992,864	-		CCNA_02839	0.54	+0.3
2,992,864	-		CCNA_02839	0.54	-0.5
2,992,878	+		CCNA_02839	0.55	+1.4
2,992,905	+		CCNA_02839	0.56	-2.0
2,992,907	+		CCNA_02839	0.56	+0.5
2,992,907	-		CCNA_02839	0.56	-0.5
2,992,914	+		CCNA_02839	0.56	-0.4
2,992,943	-		CCNA_02839	0.57	+3.2
2,992,951	-		CCNA_02839	0.57	+0.6
2,992,988	+		CCNA_02839	0.59	+2.2
2,993,000	+		CCNA_02839	0.59	-0.1
2,993,005	+		CCNA_02839	0.59	-1.9
2,993,010	+		CCNA_02839	0.59	+0.5
2,993,013	-		CCNA_02839	0.60	-2.5
2,993,051	-		CCNA_02839	0.61	-1.1
2,993,051	-		CCNA_02839	0.61	-0.1
2,993,054	+		CCNA_02839	0.61	+0.2
2,993,062	-		CCNA_02839	0.61	-1.8
2,993,063	+		CCNA_02839	0.61	+0.2
2,993,069	+		CCNA_02839	0.62	-0.4
2,993,077	-		CCNA_02839	0.62	-1.1
2,993,088	-		CCNA_02839	0.62	-0.4
2,993,099	+		CCNA_02839	0.63	-1.5
2,993,107	-		CCNA_02839	0.63	-0.6
2,993,107	-		CCNA_02839	0.63	+2.2
2,993,112	-		CCNA_02839	0.63	-0.4
2,993,112	-		CCNA_02839	0.63	-2.3
2,993,139	-		CCNA_02839	0.64	-3.1
2,993,143	+		CCNA_02839	0.64	+1.2
2,993,143	+		CCNA_02839	0.64	+0.2
2,993,158	-		CCNA_02839	0.65	-2.8
2,993,213	+		CCNA_02839	0.67	-1.3
2,993,228	-		CCNA_02839	0.67	+1.8
2,993,228	-		CCNA_02839	0.67	-1.8
2,993,310	+		CCNA_02839	0.70	-0.8
2,993,363	+		CCNA_02839	0.72	-3.5
2,993,366	-		CCNA_02839	0.72	+0.2
2,993,384	+		CCNA_02839	0.72	+0.2
2,993,392	-		CCNA_02839	0.73	-0.8
2,993,392	-		CCNA_02839	0.73	-2.4
2,993,403	-		CCNA_02839	0.73	-1.3
2,993,408	+		CCNA_02839	0.73	+2.2
2,993,416	-		CCNA_02839	0.74	-1.3
2,993,435	+		CCNA_02839	0.74	+2.2
2,993,435	-		CCNA_02839	0.74	-0.6
2,993,450	-		CCNA_02839	0.75	+2.2
2,993,452	+		CCNA_02839	0.75	+1.6
2,993,464	+		CCNA_02839	0.75	+1.2
2,993,464	+		CCNA_02839	0.75	-0.1
2,993,472	-		CCNA_02839	0.76	-2.2
2,993,484	+		CCNA_02839	0.76	+0.5
2,993,490	-		CCNA_02839	0.76	-2.1
2,993,528	-		CCNA_02839	0.77	-0.0
2,993,544	+		CCNA_02839	0.78	+0.6
2,993,565	-		CCNA_02839	0.79	+0.6
2,993,672	+		CCNA_02839	0.82	+1.2
2,993,690	-		CCNA_02839	0.83	-1.8
2,993,705	-		CCNA_02839	0.84	+0.4
2,993,708	+		CCNA_02839	0.84	+1.2
2,993,708	+		CCNA_02839	0.84	-0.6
2,993,708	+		CCNA_02839	0.84	+2.2
2,993,708	+		CCNA_02839	0.84	-0.8
2,993,708	+		CCNA_02839	0.84	+0.2
2,993,728	-		CCNA_02839	0.84	-1.3
2,993,736	-		CCNA_02839	0.85	-2.6
2,993,747	+		CCNA_02839	0.85	-1.3
2,993,747	+		CCNA_02839	0.85	-0.1
2,993,747	+		CCNA_02839	0.85	+0.6
2,993,747	+		CCNA_02839	0.85	-0.6
2,993,747	+		CCNA_02839	0.85	-0.1
2,993,755	-		CCNA_02839	0.85	-3.1
2,993,755	-		CCNA_02839	0.85	+1.2
2,993,755	-		CCNA_02839	0.85	-1.0
2,993,755	-		CCNA_02839	0.85	+1.2
2,993,755	-		CCNA_02839	0.85	+0.6
2,993,755	-		CCNA_02839	0.85	+1.2
2,993,759	+		CCNA_02839	0.86	-1.1
2,993,759	+		CCNA_02839	0.86	-1.1
2,993,772	-		CCNA_02839	0.86	-1.0
2,993,828	-		CCNA_02839	0.88	-0.7
2,993,889	+				+1.0
2,993,889	+				+0.3
2,993,889	+				-1.6
2,993,916	+				+0.6
2,994,045	-				-2.1
2,994,047	+				-1.5
2,994,047	+				-0.2
2,994,047	+				-1.8
2,994,055	-				-3.8
2,994,062	+				+0.8
2,994,110	-				-1.3
2,994,128	-				+0.8
2,994,190	-				+0.1
2,994,190	-				+0.9
2,994,257	-				+0.3
2,994,282	-				+0.4
2,994,310	+				+0.1
2,994,320	+				+0.5
2,994,324	-				+0.2
2,994,359	-				-2.3
2,994,377	-				-2.7
2,994,409	+		CCNA_02840	0.13	+0.7
2,994,417	-		CCNA_02840	0.14	-0.1
2,994,417	-		CCNA_02840	0.14	+0.1
2,994,457	+		CCNA_02840	0.18	-0.1
2,994,465	-		CCNA_02840	0.19	+0.7
2,994,467	+		CCNA_02840	0.19	+1.0
2,994,567	+		CCNA_02840	0.31	-0.3
2,994,567	+		CCNA_02840	0.31	-0.3
2,994,611	+		CCNA_02840	0.36	+0.2
2,994,630	+		CCNA_02840	0.38	-0.4
2,994,648	-		CCNA_02840	0.40	+2.2
2,994,670	+		CCNA_02840	0.42	+1.0
2,994,670	+		CCNA_02840	0.42	-0.6
2,994,690	-		CCNA_02840	0.45	+0.5
2,994,727	+		CCNA_02840	0.49	-0.3
2,994,735	-		CCNA_02840	0.50	-2.0
2,994,735	-		CCNA_02840	0.50	-1.5
2,994,761	+		CCNA_02840	0.53	-0.0
2,994,795	+		CCNA_02840	0.56	+1.9
2,994,842	-		CCNA_02840	0.62	+0.6
2,994,845	+		CCNA_02840	0.62	+1.8
2,994,848	-		CCNA_02840	0.62	+0.8
2,994,853	-		CCNA_02840	0.63	+0.4
2,994,889	-		CCNA_02840	0.67	+2.7
2,994,908	+		CCNA_02840	0.69	+0.2
2,994,908	+		CCNA_02840	0.69	+0.8
2,994,915	+		CCNA_02840	0.70	+0.8
2,994,915	+		CCNA_02840	0.70	+1.1
2,994,939	+		CCNA_02840	0.73	+1.4
2,994,939	+		CCNA_02840	0.73	-0.5
2,994,939	+		CCNA_02840	0.73	+0.4
2,994,947	-		CCNA_02840	0.74	-0.8
2,994,961	+		CCNA_02840	0.75	+1.3
2,994,971	+		CCNA_02840	0.76	+0.1
2,994,997	-		CCNA_02840	0.79	+0.2
2,995,000	-		CCNA_02840	0.80	+1.0
2,995,016	-				-2.1
2,995,068	+		CCNA_02840	0.87	+1.6
2,995,096	+				-0.1
2,995,096	+				-0.8
2,995,104	-				+0.2
2,995,104	-				+0.6
2,995,104	-				-1.1
2,995,105	+				+1.1
2,995,105	+				+0.5
2,995,108	-				-2.1
2,995,113	-				-2.3
2,995,162	+				-0.2
2,995,171	+				+0.1