Experiment: A22 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22900 and BWI76_RS22905 are separated by 271 nucleotides BWI76_RS22905 and BWI76_RS22910 are separated by 97 nucleotides
BWI76_RS22900: BWI76_RS22900 - alkanesulfonate monooxygenase, at 4,779,662 to 4,780,834
_RS22900
BWI76_RS22905: BWI76_RS22905 - ATPase AAA, at 4,781,106 to 4,783,049
_RS22905
BWI76_RS22910: BWI76_RS22910 - flap endonuclease Xni, at 4,783,147 to 4,783,902
_RS22910
Position (kb)
4781
4782
4783
4784 Strain fitness (log2 ratio)
-2
-1
0
1 at 4780.229 kb on + strand, within BWI76_RS22900 at 4780.237 kb on - strand, within BWI76_RS22900 at 4780.247 kb on - strand, within BWI76_RS22900 at 4780.262 kb on + strand, within BWI76_RS22900 at 4780.305 kb on + strand, within BWI76_RS22900 at 4780.687 kb on + strand, within BWI76_RS22900 at 4780.688 kb on + strand, within BWI76_RS22900 at 4780.974 kb on + strand at 4781.052 kb on - strand at 4781.070 kb on + strand at 4781.076 kb on + strand at 4781.306 kb on - strand, within BWI76_RS22905 at 4781.379 kb on + strand, within BWI76_RS22905 at 4781.379 kb on + strand, within BWI76_RS22905 at 4781.387 kb on - strand, within BWI76_RS22905 at 4781.766 kb on + strand, within BWI76_RS22905 at 4781.798 kb on + strand at 4781.820 kb on + strand, within BWI76_RS22905 at 4781.828 kb on + strand, within BWI76_RS22905 at 4781.830 kb on + strand, within BWI76_RS22905 at 4781.874 kb on - strand, within BWI76_RS22905 at 4782.025 kb on - strand, within BWI76_RS22905 at 4782.030 kb on + strand, within BWI76_RS22905 at 4782.111 kb on + strand, within BWI76_RS22905 at 4782.193 kb on + strand, within BWI76_RS22905 at 4782.368 kb on + strand, within BWI76_RS22905 at 4782.484 kb on - strand at 4782.554 kb on + strand, within BWI76_RS22905 at 4782.653 kb on - strand, within BWI76_RS22905 at 4782.655 kb on - strand, within BWI76_RS22905 at 4782.666 kb on - strand, within BWI76_RS22905 at 4782.855 kb on + strand at 4782.855 kb on + strand at 4783.183 kb on - strand at 4783.241 kb on + strand, within BWI76_RS22910 at 4783.414 kb on - strand, within BWI76_RS22910 at 4783.414 kb on - strand, within BWI76_RS22910 at 4783.553 kb on - strand, within BWI76_RS22910 at 4783.673 kb on + strand, within BWI76_RS22910 at 4783.681 kb on - strand, within BWI76_RS22910 at 4783.819 kb on + strand, within BWI76_RS22910
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.1 mg/ml remove 4,780,229 + BWI76_RS22900 0.48 -0.4 4,780,237 - BWI76_RS22900 0.49 -1.0 4,780,247 - BWI76_RS22900 0.50 -0.8 4,780,262 + BWI76_RS22900 0.51 +0.2 4,780,305 + BWI76_RS22900 0.55 +0.3 4,780,687 + BWI76_RS22900 0.87 -0.4 4,780,688 + BWI76_RS22900 0.87 -0.3 4,780,974 + -0.5 4,781,052 - -1.0 4,781,070 + +0.3 4,781,076 + +0.2 4,781,306 - BWI76_RS22905 0.10 -0.6 4,781,379 + BWI76_RS22905 0.14 +0.3 4,781,379 + BWI76_RS22905 0.14 -1.1 4,781,387 - BWI76_RS22905 0.14 -0.6 4,781,766 + BWI76_RS22905 0.34 -0.7 4,781,798 + -0.4 4,781,820 + BWI76_RS22905 0.37 +0.4 4,781,828 + BWI76_RS22905 0.37 -0.2 4,781,830 + BWI76_RS22905 0.37 -2.4 4,781,874 - BWI76_RS22905 0.40 -0.2 4,782,025 - BWI76_RS22905 0.47 -0.2 4,782,030 + BWI76_RS22905 0.48 -0.1 4,782,111 + BWI76_RS22905 0.52 +0.4 4,782,193 + BWI76_RS22905 0.56 +0.9 4,782,368 + BWI76_RS22905 0.65 +0.3 4,782,484 - +0.9 4,782,554 + BWI76_RS22905 0.74 +0.0 4,782,653 - BWI76_RS22905 0.80 +0.2 4,782,655 - BWI76_RS22905 0.80 -0.2 4,782,666 - BWI76_RS22905 0.80 -0.8 4,782,855 + +0.0 4,782,855 + -0.6 4,783,183 - -0.6 4,783,241 + BWI76_RS22910 0.12 +0.0 4,783,414 - BWI76_RS22910 0.35 +1.6 4,783,414 - BWI76_RS22910 0.35 -0.2 4,783,553 - BWI76_RS22910 0.54 -1.3 4,783,673 + BWI76_RS22910 0.70 +0.1 4,783,681 - BWI76_RS22910 0.71 -0.1 4,783,819 + BWI76_RS22910 0.89 +0.2
Or see this region's nucleotide sequence