Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03180 and HSERO_RS03185 are separated by 268 nucleotides HSERO_RS03185 and HSERO_RS03190 are separated by 75 nucleotides HSERO_RS03190 and HSERO_RS03195 are separated by 266 nucleotides
HSERO_RS03180: HSERO_RS03180 - hypothetical protein, at 695,574 to 697,001
_RS03180
HSERO_RS03185: HSERO_RS03185 - cupin, at 697,270 to 697,713
_RS03185
HSERO_RS03190: HSERO_RS03190 - glutathione S-transferase, at 697,789 to 698,445
_RS03190
HSERO_RS03195: HSERO_RS03195 - poly(3-hydroxybutyrate) depolymerase, at 698,712 to 699,938
_RS03195
Position (kb) 697
698
699 Strain fitness (log2 ratio) -1
0
1 at 696.827 kb on - strand, within HSERO_RS03180 at 696.941 kb on - strand at 697.235 kb on + strand at 697.307 kb on - strand at 697.549 kb on - strand, within HSERO_RS03185 at 697.706 kb on + strand at 697.876 kb on - strand, within HSERO_RS03190 at 697.876 kb on - strand, within HSERO_RS03190 at 697.902 kb on + strand, within HSERO_RS03190 at 697.992 kb on - strand, within HSERO_RS03190 at 698.246 kb on - strand, within HSERO_RS03190 at 698.273 kb on - strand, within HSERO_RS03190 at 698.512 kb on - strand at 698.729 kb on + strand at 698.877 kb on + strand at 698.900 kb on + strand, within HSERO_RS03195 at 699.310 kb on + strand, within HSERO_RS03195 at 699.352 kb on - strand, within HSERO_RS03195 at 699.372 kb on + strand, within HSERO_RS03195 at 699.377 kb on + strand, within HSERO_RS03195 at 699.379 kb on - strand, within HSERO_RS03195 at 699.410 kb on + strand, within HSERO_RS03195 at 699.439 kb on + strand, within HSERO_RS03195
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 696,827 - HSERO_RS03180 0.88 -0.6 696,941 - -0.5 697,235 + -0.0 697,307 - +0.4 697,549 - HSERO_RS03185 0.63 +0.4 697,706 + +0.3 697,876 - HSERO_RS03190 0.13 +1.6 697,876 - HSERO_RS03190 0.13 +0.8 697,902 + HSERO_RS03190 0.17 -0.7 697,992 - HSERO_RS03190 0.31 +1.1 698,246 - HSERO_RS03190 0.70 +0.4 698,273 - HSERO_RS03190 0.74 +0.5 698,512 - -0.0 698,729 + +0.7 698,877 + +1.5 698,900 + HSERO_RS03195 0.15 +0.2 699,310 + HSERO_RS03195 0.49 -0.3 699,352 - HSERO_RS03195 0.52 -0.2 699,372 + HSERO_RS03195 0.54 -0.3 699,377 + HSERO_RS03195 0.54 +0.3 699,379 - HSERO_RS03195 0.54 -0.5 699,410 + HSERO_RS03195 0.57 +0.3 699,439 + HSERO_RS03195 0.59 -0.9
Or see this region's nucleotide sequence