Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02805 and HSERO_RS02810 are separated by 143 nucleotides HSERO_RS02810 and HSERO_RS02815 are separated by 195 nucleotides HSERO_RS02815 and HSERO_RS02820 are separated by 60 nucleotides
HSERO_RS02805: HSERO_RS02805 - 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase, at 616,756 to 617,784
_RS02805
HSERO_RS02810: HSERO_RS02810 - methyltransferase, at 617,928 to 618,605
_RS02810
HSERO_RS02815: HSERO_RS02815 - HxlR family transcriptional regulator, at 618,801 to 619,247
_RS02815
HSERO_RS02820: HSERO_RS02820 - membrane protein, at 619,308 to 620,522
_RS02820
Position (kb) 617
618
619 Strain fitness (log2 ratio) -1
0
1 at 617.015 kb on - strand, within HSERO_RS02805 at 617.341 kb on + strand, within HSERO_RS02805 at 617.362 kb on + strand, within HSERO_RS02805 at 617.383 kb on + strand, within HSERO_RS02805 at 617.412 kb on + strand, within HSERO_RS02805 at 617.420 kb on - strand, within HSERO_RS02805 at 617.441 kb on + strand, within HSERO_RS02805 at 617.612 kb on + strand, within HSERO_RS02805 at 617.670 kb on + strand, within HSERO_RS02805 at 617.744 kb on + strand at 617.841 kb on + strand at 617.841 kb on + strand at 617.933 kb on - strand at 617.936 kb on - strand at 617.936 kb on - strand at 617.950 kb on - strand at 618.122 kb on + strand, within HSERO_RS02810 at 618.130 kb on - strand at 618.199 kb on - strand, within HSERO_RS02810 at 618.317 kb on + strand, within HSERO_RS02810 at 618.352 kb on - strand, within HSERO_RS02810 at 618.353 kb on - strand, within HSERO_RS02810 at 618.404 kb on + strand, within HSERO_RS02810 at 618.412 kb on - strand at 618.444 kb on + strand, within HSERO_RS02810 at 618.456 kb on + strand, within HSERO_RS02810 at 618.560 kb on - strand at 618.609 kb on + strand at 618.900 kb on + strand, within HSERO_RS02815 at 618.900 kb on + strand, within HSERO_RS02815 at 619.190 kb on + strand, within HSERO_RS02815 at 619.405 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 617,015 - HSERO_RS02805 0.25 +0.1 617,341 + HSERO_RS02805 0.57 -0.0 617,362 + HSERO_RS02805 0.59 -0.9 617,383 + HSERO_RS02805 0.61 +0.6 617,412 + HSERO_RS02805 0.64 -0.1 617,420 - HSERO_RS02805 0.65 -0.3 617,441 + HSERO_RS02805 0.67 -0.3 617,612 + HSERO_RS02805 0.83 +0.8 617,670 + HSERO_RS02805 0.89 -0.2 617,744 + -1.1 617,841 + -0.1 617,841 + +0.1 617,933 - -0.4 617,936 - +1.0 617,936 - -0.7 617,950 - -0.4 618,122 + HSERO_RS02810 0.29 +0.2 618,130 - -0.5 618,199 - HSERO_RS02810 0.40 +0.1 618,317 + HSERO_RS02810 0.57 -0.6 618,352 - HSERO_RS02810 0.63 +0.4 618,353 - HSERO_RS02810 0.63 +1.0 618,404 + HSERO_RS02810 0.70 +0.5 618,412 - -0.1 618,444 + HSERO_RS02810 0.76 +0.2 618,456 + HSERO_RS02810 0.78 +0.7 618,560 - +0.3 618,609 + +0.2 618,900 + HSERO_RS02815 0.22 -0.0 618,900 + HSERO_RS02815 0.22 +0.0 619,190 + HSERO_RS02815 0.87 -0.4 619,405 + -0.0
Or see this region's nucleotide sequence