Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01160 and HSERO_RS01165 are separated by 50 nucleotides HSERO_RS01165 and HSERO_RS01170 are separated by 54 nucleotides HSERO_RS01170 and HSERO_RS01175 are separated by 2 nucleotides
HSERO_RS01160: HSERO_RS01160 - LysR family transcriptional regulator, at 241,053 to 241,958
_RS01160
HSERO_RS01165: HSERO_RS01165 - dihydroneopterin triphosphate pyrophosphatase, at 242,009 to 242,512
_RS01165
HSERO_RS01170: HSERO_RS01170 - metal-dependent hydrolase, at 242,567 to 243,364
_RS01170
HSERO_RS01175: HSERO_RS01175 - cardiolipin synthase, at 243,367 to 244,530
_RS01175
Position (kb) 242
243
244 Strain fitness (log2 ratio) -1
0
1 at 241.592 kb on + strand, within HSERO_RS01160 at 241.758 kb on + strand, within HSERO_RS01160 at 241.781 kb on - strand, within HSERO_RS01160 at 241.945 kb on - strand at 242.026 kb on - strand at 242.117 kb on - strand, within HSERO_RS01165 at 242.142 kb on + strand, within HSERO_RS01165 at 242.145 kb on - strand, within HSERO_RS01165 at 242.216 kb on + strand, within HSERO_RS01165 at 242.216 kb on + strand, within HSERO_RS01165 at 242.247 kb on - strand, within HSERO_RS01165 at 242.346 kb on - strand, within HSERO_RS01165 at 242.534 kb on + strand at 242.611 kb on - strand at 242.611 kb on - strand at 242.693 kb on + strand, within HSERO_RS01170 at 242.701 kb on - strand, within HSERO_RS01170 at 242.729 kb on + strand, within HSERO_RS01170 at 242.937 kb on + strand, within HSERO_RS01170 at 242.968 kb on + strand, within HSERO_RS01170 at 243.010 kb on + strand, within HSERO_RS01170 at 243.117 kb on - strand, within HSERO_RS01170 at 243.159 kb on + strand, within HSERO_RS01170 at 243.188 kb on + strand, within HSERO_RS01170 at 243.373 kb on + strand at 243.419 kb on - strand at 243.880 kb on + strand, within HSERO_RS01175 at 243.968 kb on + strand, within HSERO_RS01175 at 243.968 kb on + strand, within HSERO_RS01175 at 244.161 kb on - strand, within HSERO_RS01175 at 244.221 kb on - strand, within HSERO_RS01175 at 244.274 kb on - strand, within HSERO_RS01175 at 244.304 kb on + strand, within HSERO_RS01175
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 241,592 + HSERO_RS01160 0.59 +0.3 241,758 + HSERO_RS01160 0.78 +1.0 241,781 - HSERO_RS01160 0.80 +1.0 241,945 - -0.3 242,026 - +0.1 242,117 - HSERO_RS01165 0.21 -0.6 242,142 + HSERO_RS01165 0.26 +0.1 242,145 - HSERO_RS01165 0.27 -0.4 242,216 + HSERO_RS01165 0.41 -0.8 242,216 + HSERO_RS01165 0.41 -0.5 242,247 - HSERO_RS01165 0.47 -0.2 242,346 - HSERO_RS01165 0.67 -0.7 242,534 + +0.6 242,611 - +0.3 242,611 - +0.1 242,693 + HSERO_RS01170 0.16 +0.2 242,701 - HSERO_RS01170 0.17 -1.1 242,729 + HSERO_RS01170 0.20 +0.2 242,937 + HSERO_RS01170 0.46 -0.1 242,968 + HSERO_RS01170 0.50 +1.1 243,010 + HSERO_RS01170 0.56 -0.0 243,117 - HSERO_RS01170 0.69 +0.1 243,159 + HSERO_RS01170 0.74 +1.6 243,188 + HSERO_RS01170 0.78 +0.2 243,373 + +0.2 243,419 - -0.6 243,880 + HSERO_RS01175 0.44 -0.5 243,968 + HSERO_RS01175 0.52 -0.3 243,968 + HSERO_RS01175 0.52 -0.5 244,161 - HSERO_RS01175 0.68 +0.5 244,221 - HSERO_RS01175 0.73 +0.4 244,274 - HSERO_RS01175 0.78 +0.1 244,304 + HSERO_RS01175 0.80 -0.3
Or see this region's nucleotide sequence