Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02220

Experiment: PYE 0.5x 25C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep1 28 days
2,365,282	+				+2.2
2,365,308	+				-2.9
2,365,344	+				+0.8
2,365,352	-				-0.5
2,365,352	-				-0.4
2,365,352	-				-2.0
2,365,465	+				+0.4
2,365,467	+				+0.6
2,365,472	+				+1.8
2,365,472	+				-2.2
2,365,473	-				-0.5
2,365,480	-				+1.2
2,365,480	-				+0.3
2,365,480	-				+2.2
2,365,496	+				-0.8
2,365,608	-		CCNA_02219	0.20	-2.0
2,365,613	-		CCNA_02219	0.21	-2.6
2,365,613	-		CCNA_02219	0.21	-0.8
2,365,625	+		CCNA_02219	0.22	-1.0
2,365,663	+		CCNA_02219	0.27	+0.3
2,365,669	+		CCNA_02219	0.28	+0.4
2,365,671	-		CCNA_02219	0.28	-2.0
2,365,671	-		CCNA_02219	0.28	-1.5
2,365,702	-		CCNA_02219	0.32	-0.4
2,365,713	-		CCNA_02219	0.33	-0.3
2,365,776	-		CCNA_02219	0.41	+0.2
2,365,778	+		CCNA_02219	0.41	-1.5
2,365,781	-		CCNA_02219	0.42	-0.7
2,365,783	+		CCNA_02219	0.42	+1.8
2,365,783	+		CCNA_02219	0.42	-2.1
2,365,783	+		CCNA_02219	0.42	-1.1
2,365,783	+		CCNA_02219	0.42	+1.0
2,365,783	+		CCNA_02219	0.42	-2.0
2,365,783	+		CCNA_02219	0.42	+1.2
2,365,791	-		CCNA_02219	0.43	-0.7
2,365,791	-		CCNA_02219	0.43	-0.2
2,365,791	-		CCNA_02219	0.43	+0.2
2,365,838	-		CCNA_02219	0.49	-0.2
2,365,841	+		CCNA_02219	0.49	-0.8
2,365,843	-		CCNA_02219	0.50	+0.5
2,365,849	-		CCNA_02219	0.50	+0.3
2,365,851	+		CCNA_02219	0.51	-0.4
2,365,896	-		CCNA_02219	0.56	-1.3
2,365,923	+		CCNA_02219	0.60	-2.6
2,365,931	-		CCNA_02219	0.61	-1.2
2,365,981	+		CCNA_02219	0.67	-1.2
2,365,981	+		CCNA_02219	0.67	-0.5
2,365,999	-		CCNA_02219	0.69	+2.2
2,366,031	-		CCNA_02219	0.74	+0.1
2,366,044	+		CCNA_02219	0.75	+0.5
2,366,044	+		CCNA_02219	0.75	-0.7
2,366,056	+		CCNA_02219	0.77	-0.1
2,366,079	-		CCNA_02219	0.80	-0.4
2,366,080	-		CCNA_02219	0.80	-1.4
2,366,098	+		CCNA_02219	0.82	+0.8
2,366,106	-		CCNA_02219	0.83	-0.1
2,366,163	+				+0.7
2,366,166	-				-1.9
2,366,216	+				+0.1
2,366,248	+				+0.7
2,366,271	+				+0.3
2,366,279	-				+0.6
2,366,289	+				+1.0
2,366,289	+				+0.6
2,366,289	+				+1.2
2,366,297	-				+0.5
2,366,372	+				+0.5
2,366,377	+				+0.7
2,366,377	+				-0.1
2,366,380	-				-1.2
2,366,433	-		CCNA_02220	0.12	+0.4
2,366,457	+		CCNA_02220	0.14	+0.4
2,366,457	+		CCNA_02220	0.14	-0.8
2,366,457	+		CCNA_02220	0.14	-1.1
2,366,466	-		CCNA_02220	0.15	-0.2
2,366,501	-		CCNA_02220	0.17	+1.4
2,366,517	+		CCNA_02220	0.18	-1.2
2,366,525	-		CCNA_02220	0.19	-0.3
2,366,588	+		CCNA_02220	0.23	-0.2
2,366,588	+		CCNA_02220	0.23	-1.0
2,366,595	+		CCNA_02220	0.24	-2.7
2,366,596	-		CCNA_02220	0.24	+1.2
2,366,596	-		CCNA_02220	0.24	-2.0
2,366,603	-		CCNA_02220	0.24	-0.3
2,366,622	-		CCNA_02220	0.26	+0.6
2,366,624	-		CCNA_02220	0.26	-0.9
2,366,624	-		CCNA_02220	0.26	-0.3
2,366,654	-		CCNA_02220	0.28	-1.9
2,366,702	+		CCNA_02220	0.31	-0.5
2,366,728	-		CCNA_02220	0.33	+0.2
2,366,784	+		CCNA_02220	0.37	-0.5
2,366,785	-		CCNA_02220	0.37	-0.6
2,366,805	+		CCNA_02220	0.38	+2.2
2,366,820	+		CCNA_02220	0.39	-1.6
2,366,820	+		CCNA_02220	0.39	-2.3
2,366,820	+		CCNA_02220	0.39	-1.1
2,366,820	+		CCNA_02220	0.39	-0.6
2,366,820	+		CCNA_02220	0.39	-3.0
2,366,828	-		CCNA_02220	0.40	+0.2
2,366,828	-		CCNA_02220	0.40	+2.2
2,366,843	+		CCNA_02220	0.41	-0.8
2,366,965	-		CCNA_02220	0.49	-0.8
2,367,001	+		CCNA_02220	0.52	+0.2
2,367,011	+		CCNA_02220	0.52	-1.7
2,367,011	-		CCNA_02220	0.52	+0.0
2,367,013	-		CCNA_02220	0.53	-1.6
2,367,082	-		CCNA_02220	0.57	+0.6
2,367,092	-		CCNA_02220	0.58	-0.0
2,367,201	+		CCNA_02220	0.65	+0.2
2,367,206	+		CCNA_02220	0.66	+0.2
2,367,209	-		CCNA_02220	0.66	-2.0
2,367,209	-		CCNA_02220	0.66	-0.8
2,367,241	+		CCNA_02220	0.68	-1.3
2,367,249	-		CCNA_02220	0.69	+0.6
2,367,259	-		CCNA_02220	0.69	-0.8
2,367,312	-		CCNA_02220	0.73	+0.8
2,367,374	+		CCNA_02220	0.77	-1.3
2,367,405	-		CCNA_02220	0.80	+0.3
2,367,410	-		CCNA_02220	0.80	-0.7
2,367,433	-		CCNA_02220	0.82	-0.6
2,367,464	-		CCNA_02220	0.84	-1.2
2,367,464	-		CCNA_02220	0.84	+1.8
2,367,467	+		CCNA_02220	0.84	+0.6
2,367,467	+		CCNA_02220	0.84	-2.3
2,367,475	-		CCNA_02220	0.84	+0.2
2,367,477	+		CCNA_02220	0.85	-2.0
2,367,541	-		CCNA_02220	0.89	-0.8
2,367,596	+				+0.2
2,367,609	-				-0.6
2,367,635	+				-0.6
2,367,635	+				+0.4
2,367,635	+				+1.7
2,367,635	+				-1.4
2,367,640	+				-0.6
2,367,643	-				-2.0
2,367,643	-				-0.7
2,367,643	-				+0.3
2,367,643	-				+0.2
2,367,645	+				+1.2
2,367,650	+				+1.6
2,367,655	+				-0.7
2,367,658	-				+1.6
2,367,663	-				-0.8
2,367,663	-				-2.4
2,367,721	-				-0.9
2,367,766	-				+1.1
2,367,809	+				-1.3
2,367,809	+				+0.9
2,367,809	+				-0.2
2,367,817	-				+0.5
2,367,827	-				+1.7
2,367,827	-				+1.5
2,367,827	-				+0.5
2,367,846	+				+0.4
2,367,862	+				+0.9
2,367,862	+				-0.3
2,367,870	-				+0.1
2,367,870	-				+0.8
2,367,991	-				+3.1
2,368,009	-				+3.0
2,368,019	+				+1.6
2,368,091	-				+2.4
2,368,114	+				+1.6
2,368,122	-				+5.0
2,368,146	+				+0.8
2,368,146	-				+1.6
2,368,146	-				+3.3
2,368,170	+				-1.2
2,368,170	+				+0.7
2,368,178	-				+1.3
2,368,178	-				+2.6
2,368,178	-				+1.5
2,368,206	-		CCNA_02221	0.10	+2.1
2,368,217	+		CCNA_02221	0.11	+0.8
2,368,287	+		CCNA_02221	0.13	-1.6
2,368,300	+		CCNA_02221	0.14	+1.5
2,368,319	-		CCNA_02221	0.15	+3.0
2,368,337	+		CCNA_02221	0.15	-0.5
2,368,509	-		CCNA_02221	0.22	+3.0
2,368,514	-		CCNA_02221	0.22	+2.8
2,368,514	-		CCNA_02221	0.22	+3.0
2,368,514	-		CCNA_02221	0.22	+2.8
2,368,520	-		CCNA_02221	0.22	+1.0
2,368,520	-		CCNA_02221	0.22	+2.4
2,368,563	-		CCNA_02221	0.24	+1.3
2,368,563	-		CCNA_02221	0.24	+1.6
2,368,569	-		CCNA_02221	0.24	+1.9
2,368,573	-		CCNA_02221	0.24	+2.3
2,368,597	+		CCNA_02221	0.25	-0.9
2,368,602	+		CCNA_02221	0.25	-0.0
2,368,605	-		CCNA_02221	0.25	+1.4
2,368,605	-		CCNA_02221	0.25	+2.3
2,368,631	-		CCNA_02221	0.26	+2.0
2,368,636	-		CCNA_02221	0.26	+2.6
2,368,641	-		CCNA_02221	0.27	+2.4
2,368,657	-		CCNA_02221	0.27	+4.3
2,368,686	+		CCNA_02221	0.28	+2.2