Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01807

Experiment: PYE 0.5x 25C survival rep1 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 25C survival rep1 28 days
1,930,715	+		CCNA_01806	0.35	+2.0
1,930,741	+		CCNA_01806	0.36	+1.1
1,930,750	-		CCNA_01806	0.37	-0.5
1,930,759	+		CCNA_01806	0.38	+1.0
1,930,857	+		CCNA_01806	0.44	+0.3
1,930,865	-		CCNA_01806	0.45	+0.9
1,930,947	+		CCNA_01806	0.50	+0.4
1,930,967	+		CCNA_01806	0.52	+1.5
1,930,975	-		CCNA_01806	0.52	+3.2
1,931,031	-		CCNA_01806	0.56	-0.1
1,931,063	-		CCNA_01806	0.58	-0.0
1,931,082	-		CCNA_01806	0.60	+0.8
1,931,111	+		CCNA_01806	0.62	+0.1
1,931,133	+		CCNA_01806	0.63	+1.1
1,931,164	+		CCNA_01806	0.65	+1.4
1,931,201	-		CCNA_01806	0.68	+0.2
1,931,203	+		CCNA_01806	0.68	+0.7
1,931,211	-		CCNA_01806	0.69	-0.9
1,931,213	+		CCNA_01806	0.69	+1.0
1,931,233	-		CCNA_01806	0.70	-1.7
1,931,260	+		CCNA_01806	0.72	+0.7
1,931,260	+		CCNA_01806	0.72	+1.5
1,931,260	+		CCNA_01806	0.72	+1.1
1,931,268	-		CCNA_01806	0.72	-1.1
1,931,268	-		CCNA_01806	0.72	-2.0
1,931,290	+		CCNA_01806	0.74	+0.6
1,931,300	+		CCNA_01806	0.75	+0.4
1,931,300	+		CCNA_01806	0.75	+1.3
1,931,300	+		CCNA_01806	0.75	+0.5
1,931,300	+		CCNA_01806	0.75	+0.9
1,931,308	-		CCNA_01806	0.75	-2.3
1,931,308	-		CCNA_01806	0.75	-2.2
1,931,308	-		CCNA_01806	0.75	+0.3
1,931,308	-		CCNA_01806	0.75	-3.0
1,931,308	-		CCNA_01806	0.75	-0.2
1,931,314	-		CCNA_01806	0.76	+2.7
1,931,345	+		CCNA_01806	0.78	-1.3
1,931,345	+		CCNA_01806	0.78	-2.2
1,931,371	+		CCNA_01806	0.80	+1.3
1,931,374	-		CCNA_01806	0.80	-1.2
1,931,374	-				-0.3
1,931,374	-		CCNA_01806	0.80	-0.8
1,931,379	-		CCNA_01806	0.80	-1.3
1,931,390	+		CCNA_01806	0.81	+0.1
1,931,416	-		CCNA_01806	0.83	-0.9
1,931,416	-		CCNA_01806	0.83	-0.5
1,931,453	-		CCNA_01806	0.85	-1.4
1,931,460	+		CCNA_01806	0.86	+1.1
1,931,460	+		CCNA_01806	0.86	+1.1
1,931,463	-		CCNA_01806	0.86	-2.1
1,931,479	+		CCNA_01806	0.87	+0.4
1,931,505	-		CCNA_01806	0.89	-1.8
1,931,545	+				+0.4
1,931,571	+				+0.6
1,931,579	+				+1.8
1,931,607	-				-0.3
1,931,702	-				+1.4
1,931,752	+				-0.6
1,931,831	+				-2.0
1,931,908	-		CCNA_01807	0.13	-1.8
1,931,948	-		CCNA_01807	0.16	-1.6
1,931,953	-		CCNA_01807	0.16	-0.9
1,931,965	+		CCNA_01807	0.17	+0.7
1,931,973	-		CCNA_01807	0.18	-1.1
1,932,096	-		CCNA_01807	0.25	-3.0
1,932,175	-		CCNA_01807	0.31	+0.1
1,932,202	+		CCNA_01807	0.32	+2.7
1,932,217	-		CCNA_01807	0.33	-1.7
1,932,285	-		CCNA_01807	0.38	-2.8
1,932,285	-		CCNA_01807	0.38	-1.0
1,932,285	-		CCNA_01807	0.38	-0.8
1,932,327	+		CCNA_01807	0.40	-0.8
1,932,376	-		CCNA_01807	0.43	-0.9
1,932,411	-		CCNA_01807	0.46	-1.0
1,932,426	+		CCNA_01807	0.47	+0.7
1,932,434	-		CCNA_01807	0.47	-1.2
1,932,436	+		CCNA_01807	0.47	-0.1
1,932,455	+		CCNA_01807	0.49	+1.1
1,932,455	+		CCNA_01807	0.49	-2.3
1,932,461	+		CCNA_01807	0.49	-2.8
1,932,463	-		CCNA_01807	0.49	-0.5
1,932,499	+		CCNA_01807	0.51	-0.6
1,932,504	-		CCNA_01807	0.52	+0.6
1,932,512	-		CCNA_01807	0.52	-2.0
1,932,525	+		CCNA_01807	0.53	+0.4
1,932,575	-		CCNA_01807	0.56	-0.9
1,932,593	+		CCNA_01807	0.57	-2.4
1,932,594	+		CCNA_01807	0.57	+0.4
1,932,601	-		CCNA_01807	0.58	-0.1
1,932,613	-		CCNA_01807	0.59	-0.4
1,932,628	-		CCNA_01807	0.60	-1.6
1,932,628	-		CCNA_01807	0.60	-1.0
1,932,628	-				+1.1
1,932,632	+		CCNA_01807	0.60	-1.8
1,932,649	+		CCNA_01807	0.61	-1.2
1,932,667	-		CCNA_01807	0.62	-1.1
1,932,670	+		CCNA_01807	0.62	+1.3
1,932,670	+		CCNA_01807	0.62	-0.6
1,932,675	+		CCNA_01807	0.63	-0.4
1,932,675	+		CCNA_01807	0.63	+0.1
1,932,675	+		CCNA_01807	0.63	+0.4
1,932,683	-		CCNA_01807	0.63	-1.8
1,932,683	-		CCNA_01807	0.63	+0.9
1,932,683	-		CCNA_01807	0.63	-1.3
1,932,683	-		CCNA_01807	0.63	-2.1
1,932,709	+		CCNA_01807	0.65	-1.0
1,932,730	+		CCNA_01807	0.66	-0.6
1,932,749	+		CCNA_01807	0.67	-0.3
1,932,754	+		CCNA_01807	0.68	+0.4
1,932,777	-		CCNA_01807	0.69	-2.0
1,932,879	-		CCNA_01807	0.76	-2.4
1,932,906	-		CCNA_01807	0.78	+0.7
1,932,931	-		CCNA_01807	0.79	-2.2
1,932,944	+		CCNA_01807	0.80	-2.6
1,933,000	+		CCNA_01807	0.84	+1.1
1,933,073	-		CCNA_01807	0.88	-1.5
1,933,101	+				-1.8
1,933,101	+				-1.7
1,933,109	-				-2.6
1,933,112	+				+2.7
1,933,117	+				-1.5
1,933,127	+				-1.1
1,933,133	-				-0.3
1,933,135	-				-1.1
1,933,140	-				-2.7
1,933,140	-				-1.3
1,933,140	-				+0.8
1,933,140	-				-0.6
1,933,155	-				+1.2
1,933,163	-				+1.3
1,933,201	-				+0.0
1,933,227	-				-0.0
1,933,236	+				+1.7
1,933,246	-				+0.3
1,933,313	-				-0.0
1,933,355	+				-1.2
1,933,364	-				+4.3
1,933,399	-				+3.0
1,933,479	-		CCNA_01808	0.13	-2.9
1,933,517	-		CCNA_01808	0.16	+1.5
1,933,520	+		CCNA_01808	0.16	-0.3
1,933,521	+		CCNA_01808	0.17	+0.7
1,933,647	-		CCNA_01808	0.28	-1.9
1,933,671	+		CCNA_01808	0.30	-1.4
1,933,679	-		CCNA_01808	0.31	-0.3
1,933,679	-		CCNA_01808	0.31	-2.6
1,933,689	-		CCNA_01808	0.32	-1.8
1,933,692	+		CCNA_01808	0.32	+2.7
1,933,692	+		CCNA_01808	0.32	+0.7
1,933,692	+		CCNA_01808	0.32	-0.1
1,933,700	-		CCNA_01808	0.33	+3.7
1,933,721	+		CCNA_01808	0.35	-0.1
1,933,734	+		CCNA_01808	0.36	-0.5
1,933,749	-		CCNA_01808	0.38	-0.1
1,933,759	-		CCNA_01808	0.39	-0.5
1,933,779	-		CCNA_01808	0.40	-1.8
1,933,803	+		CCNA_01808	0.43	-0.8
1,933,803	+		CCNA_01808	0.43	-0.8
1,933,803	-		CCNA_01808	0.43	-1.2
1,933,803	-		CCNA_01808	0.43	+1.4
1,933,880	+		CCNA_01808	0.50	+1.2
1,933,882	+		CCNA_01808	0.50	-0.6
1,933,883	-		CCNA_01808	0.50	+1.5
1,933,888	-		CCNA_01808	0.51	-1.2
1,933,890	-		CCNA_01808	0.51	-1.5
1,933,890	-		CCNA_01808	0.51	+0.4
1,933,906	-		CCNA_01808	0.52	-0.2
1,933,945	-		CCNA_01808	0.56	-2.5
1,933,949	+		CCNA_01808	0.56	-0.4
1,933,966	-		CCNA_01808	0.58	+0.4
1,933,974	+		CCNA_01808	0.59	+2.7
1,933,992	+		CCNA_01808	0.60	+2.7
1,933,992	+		CCNA_01808	0.60	+0.1
1,933,992	+		CCNA_01808	0.60	-1.8
1,934,000	-		CCNA_01808	0.61	+0.2
1,934,000	-		CCNA_01808	0.61	+0.4
1,934,076	+		CCNA_01808	0.68	-1.0
1,934,094	-		CCNA_01808	0.70	-2.0
1,934,110	+		CCNA_01808	0.71	+1.7
1,934,110	+		CCNA_01808	0.71	+2.7
1,934,183	+		CCNA_01808	0.78	-1.2
1,934,183	+		CCNA_01808	0.78	-0.1
1,934,183	+		CCNA_01808	0.78	+3.1
1,934,226	+		CCNA_01808	0.82	-1.2
1,934,231	+		CCNA_01808	0.82	-0.3
1,934,234	-		CCNA_01808	0.83	+0.5
1,934,236	+		CCNA_01808	0.83	+0.4
1,934,236	+		CCNA_01808	0.83	+2.7
1,934,239	-		CCNA_01808	0.83	-1.7
1,934,239	-				-0.8
1,934,239	-		CCNA_01808	0.83	+1.9
1,934,244	-		CCNA_01808	0.84	+1.7
1,934,244	-		CCNA_01808	0.84	+0.1
1,934,244	-		CCNA_01808	0.84	+0.2