Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27850 and BWI76_RS27855 are separated by 223 nucleotides BWI76_RS27855 and BWI76_RS27860 are separated by 17 nucleotides
BWI76_RS27850: BWI76_RS27850 - DNA-binding transcriptional regulator DsdC, at 5,776,227 to 5,777,156
_RS27850
BWI76_RS27855: BWI76_RS27855 - D-serine transporter DsdX, at 5,777,380 to 5,778,717
_RS27855
BWI76_RS27860: BWI76_RS27860 - D-serine dehydratase, at 5,778,735 to 5,780,063
_RS27860
Position (kb) 5777
5778
5779 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5776.503 kb on + strand, within BWI76_RS27850 at 5776.799 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.804 kb on + strand, within BWI76_RS27850 at 5776.812 kb on - strand, within BWI76_RS27850 at 5777.023 kb on + strand, within BWI76_RS27850 at 5777.089 kb on + strand at 5777.410 kb on + strand at 5777.410 kb on + strand at 5777.418 kb on - strand at 5777.425 kb on + strand at 5777.442 kb on - strand at 5777.521 kb on - strand, within BWI76_RS27855 at 5777.666 kb on + strand, within BWI76_RS27855 at 5777.828 kb on - strand, within BWI76_RS27855 at 5777.997 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.075 kb on + strand, within BWI76_RS27855 at 5778.098 kb on + strand, within BWI76_RS27855 at 5778.574 kb on + strand, within BWI76_RS27855 at 5778.854 kb on - strand at 5778.854 kb on - strand at 5779.033 kb on + strand, within BWI76_RS27860 at 5779.167 kb on - strand, within BWI76_RS27860 at 5779.214 kb on + strand, within BWI76_RS27860 at 5779.222 kb on - strand, within BWI76_RS27860 at 5779.290 kb on - strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.296 kb on + strand, within BWI76_RS27860 at 5779.304 kb on - strand, within BWI76_RS27860 at 5779.384 kb on - strand, within BWI76_RS27860 at 5779.417 kb on + strand, within BWI76_RS27860 at 5779.503 kb on - strand, within BWI76_RS27860 at 5779.692 kb on - strand, within BWI76_RS27860
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 5,776,503 + BWI76_RS27850 0.30 +0.2 5,776,799 + BWI76_RS27850 0.62 +0.0 5,776,804 + BWI76_RS27850 0.62 +0.5 5,776,804 + BWI76_RS27850 0.62 +1.7 5,776,812 - BWI76_RS27850 0.63 +0.0 5,777,023 + BWI76_RS27850 0.86 -0.2 5,777,089 + -1.3 5,777,410 + -0.0 5,777,410 + -0.2 5,777,418 - -0.4 5,777,425 + -1.0 5,777,442 - -0.4 5,777,521 - BWI76_RS27855 0.11 +3.2 5,777,666 + BWI76_RS27855 0.21 +0.0 5,777,828 - BWI76_RS27855 0.33 -0.2 5,777,997 + BWI76_RS27855 0.46 +0.6 5,778,075 + +0.2 5,778,075 + BWI76_RS27855 0.52 +0.6 5,778,075 + BWI76_RS27855 0.52 +0.3 5,778,075 + BWI76_RS27855 0.52 -0.4 5,778,098 + BWI76_RS27855 0.54 -0.2 5,778,574 + BWI76_RS27855 0.89 -0.3 5,778,854 - -1.3 5,778,854 - -1.4 5,779,033 + BWI76_RS27860 0.22 -2.5 5,779,167 - BWI76_RS27860 0.33 -1.3 5,779,214 + BWI76_RS27860 0.36 -1.3 5,779,222 - BWI76_RS27860 0.37 -2.7 5,779,290 - BWI76_RS27860 0.42 -1.8 5,779,296 + BWI76_RS27860 0.42 -1.9 5,779,296 + BWI76_RS27860 0.42 -2.1 5,779,304 - BWI76_RS27860 0.43 -1.2 5,779,384 - BWI76_RS27860 0.49 -1.3 5,779,417 + BWI76_RS27860 0.51 -1.7 5,779,503 - BWI76_RS27860 0.58 -0.5 5,779,692 - BWI76_RS27860 0.72 -1.4
Or see this region's nucleotide sequence