Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27060 and BWI76_RS27065 are separated by 173 nucleotides BWI76_RS27065 and BWI76_RS27070 are separated by 101 nucleotides BWI76_RS27070 and BWI76_RS27075 are separated by 118 nucleotides
BWI76_RS27060: BWI76_RS27060 - alpha-amylase, at 5,614,459 to 5,616,492
_RS27060
BWI76_RS27065: BWI76_RS27065 - valine--pyruvate transaminase, at 5,616,666 to 5,617,925
_RS27065
BWI76_RS27070: BWI76_RS27070 - 4Fe-4S ferredoxin, at 5,618,027 to 5,618,515
_RS27070
BWI76_RS27075: BWI76_RS27075 - IclR family transcriptional regulator, at 5,618,634 to 5,619,452
_RS27075
Position (kb) 5616
5617
5618 Strain fitness (log2 ratio) -2
-1
0
1 at 5615.700 kb on + strand, within BWI76_RS27060 at 5615.710 kb on - strand, within BWI76_RS27060 at 5615.760 kb on + strand, within BWI76_RS27060 at 5615.971 kb on + strand, within BWI76_RS27060 at 5616.033 kb on - strand, within BWI76_RS27060 at 5616.061 kb on + strand, within BWI76_RS27060 at 5616.155 kb on + strand, within BWI76_RS27060 at 5616.159 kb on - strand, within BWI76_RS27060 at 5616.215 kb on + strand, within BWI76_RS27060 at 5616.220 kb on + strand, within BWI76_RS27060 at 5616.220 kb on + strand, within BWI76_RS27060 at 5616.287 kb on - strand, within BWI76_RS27060 at 5616.346 kb on - strand at 5616.366 kb on + strand at 5616.427 kb on + strand at 5616.479 kb on - strand at 5616.481 kb on + strand at 5616.628 kb on - strand at 5616.842 kb on - strand, within BWI76_RS27065 at 5616.887 kb on + strand, within BWI76_RS27065 at 5616.902 kb on + strand, within BWI76_RS27065 at 5616.909 kb on - strand, within BWI76_RS27065 at 5617.003 kb on + strand, within BWI76_RS27065 at 5617.140 kb on - strand, within BWI76_RS27065 at 5617.234 kb on + strand, within BWI76_RS27065 at 5617.350 kb on + strand, within BWI76_RS27065 at 5617.506 kb on - strand, within BWI76_RS27065 at 5617.524 kb on + strand, within BWI76_RS27065 at 5617.575 kb on - strand, within BWI76_RS27065 at 5617.696 kb on + strand, within BWI76_RS27065 at 5617.697 kb on + strand, within BWI76_RS27065 at 5617.705 kb on - strand, within BWI76_RS27065 at 5617.763 kb on - strand, within BWI76_RS27065 at 5617.903 kb on + strand at 5617.913 kb on + strand at 5617.969 kb on - strand at 5618.091 kb on + strand, within BWI76_RS27070 at 5618.104 kb on - strand at 5618.185 kb on + strand, within BWI76_RS27070 at 5618.224 kb on + strand, within BWI76_RS27070 at 5618.234 kb on - strand, within BWI76_RS27070 at 5618.255 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.413 kb on + strand, within BWI76_RS27070 at 5618.421 kb on - strand, within BWI76_RS27070 at 5618.423 kb on + strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.431 kb on - strand, within BWI76_RS27070 at 5618.638 kb on + strand at 5618.800 kb on + strand, within BWI76_RS27075 at 5618.906 kb on - strand, within BWI76_RS27075
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 5,615,700 + BWI76_RS27060 0.61 -0.1 5,615,710 - BWI76_RS27060 0.62 -0.3 5,615,760 + BWI76_RS27060 0.64 +0.5 5,615,971 + BWI76_RS27060 0.74 -0.6 5,616,033 - BWI76_RS27060 0.77 +1.5 5,616,061 + BWI76_RS27060 0.79 -0.3 5,616,155 + BWI76_RS27060 0.83 -0.4 5,616,159 - BWI76_RS27060 0.84 -1.7 5,616,215 + BWI76_RS27060 0.86 -1.1 5,616,220 + BWI76_RS27060 0.87 +0.0 5,616,220 + BWI76_RS27060 0.87 +0.5 5,616,287 - BWI76_RS27060 0.90 +0.5 5,616,346 - +0.2 5,616,366 + -0.4 5,616,427 + -0.1 5,616,479 - -2.0 5,616,481 + -1.5 5,616,628 - +0.6 5,616,842 - BWI76_RS27065 0.14 +0.1 5,616,887 + BWI76_RS27065 0.18 -0.3 5,616,902 + BWI76_RS27065 0.19 -0.4 5,616,909 - BWI76_RS27065 0.19 -0.1 5,617,003 + BWI76_RS27065 0.27 +0.4 5,617,140 - BWI76_RS27065 0.38 +0.4 5,617,234 + BWI76_RS27065 0.45 -0.2 5,617,350 + BWI76_RS27065 0.54 -0.0 5,617,506 - BWI76_RS27065 0.67 -0.4 5,617,524 + BWI76_RS27065 0.68 +1.1 5,617,575 - BWI76_RS27065 0.72 +0.2 5,617,696 + BWI76_RS27065 0.82 -0.4 5,617,697 + BWI76_RS27065 0.82 -1.0 5,617,705 - BWI76_RS27065 0.82 +0.1 5,617,763 - BWI76_RS27065 0.87 +0.4 5,617,903 + -0.9 5,617,913 + +0.5 5,617,969 - -0.1 5,618,091 + BWI76_RS27070 0.13 -0.3 5,618,104 - +1.2 5,618,185 + BWI76_RS27070 0.32 +0.0 5,618,224 + BWI76_RS27070 0.40 +0.3 5,618,234 - BWI76_RS27070 0.42 -0.5 5,618,255 + BWI76_RS27070 0.47 +0.8 5,618,413 + BWI76_RS27070 0.79 -1.0 5,618,413 + BWI76_RS27070 0.79 -0.2 5,618,421 - BWI76_RS27070 0.81 -0.1 5,618,423 + BWI76_RS27070 0.81 +0.2 5,618,431 - BWI76_RS27070 0.83 -0.4 5,618,431 - BWI76_RS27070 0.83 -0.3 5,618,431 - BWI76_RS27070 0.83 +0.2 5,618,638 + +0.1 5,618,800 + BWI76_RS27075 0.20 -1.0 5,618,906 - BWI76_RS27075 0.33 -0.7
Or see this region's nucleotide sequence