Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24095 and BWI76_RS24100 are separated by 16 nucleotides BWI76_RS24100 and BWI76_RS24105 are separated by 8 nucleotides BWI76_RS24105 and BWI76_RS24110 overlap by 4 nucleotides BWI76_RS24110 and BWI76_RS24115 are separated by 12 nucleotides BWI76_RS24115 and BWI76_RS24120 overlap by 8 nucleotides
BWI76_RS24095: BWI76_RS24095 - twitching motility protein PilT, at 5,026,489 to 5,027,469
_RS24095
BWI76_RS24100: BWI76_RS24100 - YggS family pyridoxal phosphate enzyme, at 5,027,486 to 5,028,199
_RS24100
BWI76_RS24105: BWI76_RS24105 - resistance protein, at 5,028,208 to 5,028,774
_RS24105
BWI76_RS24110: BWI76_RS24110 - YggU family protein, at 5,028,771 to 5,029,061
_RS24110
BWI76_RS24115: BWI76_RS24115 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 5,029,074 to 5,029,667
_RS24115
BWI76_RS24120: BWI76_RS24120 - YggW family oxidoreductase, at 5,029,660 to 5,030,796
_RS24120
Position (kb) 5028
5029 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5027.309 kb on + strand, within BWI76_RS24095 at 5027.340 kb on + strand, within BWI76_RS24095 at 5027.433 kb on + strand at 5027.446 kb on - strand at 5027.513 kb on - strand at 5027.513 kb on - strand at 5027.568 kb on + strand, within BWI76_RS24100 at 5027.838 kb on - strand, within BWI76_RS24100 at 5027.885 kb on + strand, within BWI76_RS24100 at 5027.888 kb on - strand, within BWI76_RS24100 at 5027.948 kb on - strand, within BWI76_RS24100 at 5027.963 kb on - strand, within BWI76_RS24100 at 5028.060 kb on - strand, within BWI76_RS24100 at 5028.132 kb on + strand at 5028.140 kb on - strand at 5028.140 kb on - strand at 5028.413 kb on + strand, within BWI76_RS24105 at 5028.413 kb on + strand, within BWI76_RS24105 at 5028.421 kb on - strand, within BWI76_RS24105 at 5028.421 kb on - strand, within BWI76_RS24105 at 5028.447 kb on + strand, within BWI76_RS24105 at 5028.447 kb on + strand, within BWI76_RS24105 at 5028.560 kb on + strand, within BWI76_RS24105 at 5028.723 kb on + strand at 5028.759 kb on + strand at 5028.824 kb on + strand, within BWI76_RS24110 at 5028.824 kb on + strand, within BWI76_RS24110 at 5029.038 kb on - strand at 5029.292 kb on - strand, within BWI76_RS24115 at 5029.422 kb on + strand, within BWI76_RS24115 at 5029.461 kb on + strand, within BWI76_RS24115 at 5029.584 kb on + strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115 at 5029.592 kb on - strand, within BWI76_RS24115
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 5,027,309 + BWI76_RS24095 0.84 +0.3 5,027,340 + BWI76_RS24095 0.87 -0.2 5,027,433 + +0.0 5,027,446 - +0.5 5,027,513 - +0.3 5,027,513 - -0.3 5,027,568 + BWI76_RS24100 0.11 -0.4 5,027,838 - BWI76_RS24100 0.49 +0.6 5,027,885 + BWI76_RS24100 0.56 +2.3 5,027,888 - BWI76_RS24100 0.56 +0.8 5,027,948 - BWI76_RS24100 0.65 +0.3 5,027,963 - BWI76_RS24100 0.67 +0.9 5,028,060 - BWI76_RS24100 0.80 +1.0 5,028,132 + +0.6 5,028,140 - +0.1 5,028,140 - +0.5 5,028,413 + BWI76_RS24105 0.36 +2.5 5,028,413 + BWI76_RS24105 0.36 +0.5 5,028,421 - BWI76_RS24105 0.38 +1.0 5,028,421 - BWI76_RS24105 0.38 +1.4 5,028,447 + BWI76_RS24105 0.42 +0.3 5,028,447 + BWI76_RS24105 0.42 +0.8 5,028,560 + BWI76_RS24105 0.62 -0.4 5,028,723 + +0.5 5,028,759 + -0.5 5,028,824 + BWI76_RS24110 0.18 +2.1 5,028,824 + BWI76_RS24110 0.18 -0.2 5,029,038 - -0.3 5,029,292 - BWI76_RS24115 0.37 +0.5 5,029,422 + BWI76_RS24115 0.59 -0.1 5,029,461 + BWI76_RS24115 0.65 +0.4 5,029,584 + BWI76_RS24115 0.86 +0.1 5,029,592 - BWI76_RS24115 0.87 -2.1 5,029,592 - BWI76_RS24115 0.87 +0.4 5,029,592 - BWI76_RS24115 0.87 -0.3
Or see this region's nucleotide sequence