Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23820 and BWI76_RS23825 are separated by 8 nucleotides BWI76_RS23825 and BWI76_RS23830 overlap by 20 nucleotides BWI76_RS23830 and BWI76_RS23835 are separated by 243 nucleotides
BWI76_RS23820: BWI76_RS23820 - flavodoxin FldB, at 4,972,790 to 4,973,311
_RS23820
BWI76_RS23825: BWI76_RS23825 - hypothetical protein, at 4,973,320 to 4,973,730
_RS23825
BWI76_RS23830: BWI76_RS23830 - hypothetical protein, at 4,973,711 to 4,973,977
_RS23830
BWI76_RS23835: BWI76_RS23835 - folate-binding protein, at 4,974,221 to 4,975,204
_RS23835
Position (kb) 4973
4974 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4972.742 kb on + strand at 4972.866 kb on + strand, within BWI76_RS23820 at 4973.138 kb on + strand, within BWI76_RS23820 at 4973.139 kb on + strand, within BWI76_RS23820 at 4973.508 kb on + strand, within BWI76_RS23825 at 4973.516 kb on - strand, within BWI76_RS23825 at 4973.573 kb on + strand, within BWI76_RS23825 at 4973.581 kb on - strand, within BWI76_RS23825 at 4973.602 kb on + strand, within BWI76_RS23825 at 4973.606 kb on - strand, within BWI76_RS23825 at 4973.613 kb on + strand, within BWI76_RS23825 at 4973.623 kb on - strand, within BWI76_RS23825 at 4973.635 kb on - strand, within BWI76_RS23825 at 4973.773 kb on + strand, within BWI76_RS23830 at 4973.773 kb on + strand, within BWI76_RS23830 at 4973.868 kb on + strand, within BWI76_RS23830 at 4973.879 kb on + strand, within BWI76_RS23830 at 4973.931 kb on + strand, within BWI76_RS23830 at 4973.938 kb on + strand, within BWI76_RS23830 at 4974.039 kb on - strand at 4974.121 kb on + strand at 4974.129 kb on - strand at 4974.129 kb on - strand at 4974.206 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,972,742 + +0.8 4,972,866 + BWI76_RS23820 0.15 +0.4 4,973,138 + BWI76_RS23820 0.67 -0.4 4,973,139 + BWI76_RS23820 0.67 -0.5 4,973,508 + BWI76_RS23825 0.46 -2.5 4,973,516 - BWI76_RS23825 0.48 -1.9 4,973,573 + BWI76_RS23825 0.62 -3.6 4,973,581 - BWI76_RS23825 0.64 -2.2 4,973,602 + BWI76_RS23825 0.69 -2.1 4,973,606 - BWI76_RS23825 0.70 -2.2 4,973,613 + BWI76_RS23825 0.71 -3.6 4,973,623 - BWI76_RS23825 0.74 -0.4 4,973,635 - BWI76_RS23825 0.77 -2.9 4,973,773 + BWI76_RS23830 0.23 -2.4 4,973,773 + BWI76_RS23830 0.23 -2.0 4,973,868 + BWI76_RS23830 0.59 -1.4 4,973,879 + BWI76_RS23830 0.63 -1.6 4,973,931 + BWI76_RS23830 0.82 -2.0 4,973,938 + BWI76_RS23830 0.85 -3.1 4,974,039 - +0.7 4,974,121 + +0.9 4,974,129 - +0.7 4,974,129 - +1.0 4,974,206 + -0.2
Or see this region's nucleotide sequence