Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23750 and BWI76_RS23755 are separated by 52 nucleotides BWI76_RS23755 and BWI76_RS23760 are separated by 159 nucleotides BWI76_RS23760 and BWI76_RS23765 are separated by 80 nucleotides BWI76_RS23765 and BWI76_RS23770 are separated by 89 nucleotides
BWI76_RS23750: BWI76_RS23750 - arsenical efflux pump membrane protein ArsB, at 4,959,191 to 4,960,483
_RS23750
BWI76_RS23755: BWI76_RS23755 - transcriptional regulator, at 4,960,536 to 4,960,886
_RS23755
BWI76_RS23760: BWI76_RS23760 - tRNA-Gly, at 4,961,046 to 4,961,119
_RS23760
BWI76_RS23765: BWI76_RS23765 - peptidase M23, at 4,961,200 to 4,961,925
_RS23765
BWI76_RS23770: BWI76_RS23770 - LysR family transcriptional regulator, at 4,962,015 to 4,962,911
_RS23770
Position (kb)
4961
4962 Strain fitness (log2 ratio)
-1
0
1 at 4960.078 kb on - strand at 4960.078 kb on - strand, within BWI76_RS23750 at 4960.179 kb on - strand, within BWI76_RS23750 at 4960.189 kb on - strand, within BWI76_RS23750 at 4960.243 kb on + strand, within BWI76_RS23750 at 4960.243 kb on + strand, within BWI76_RS23750 at 4960.331 kb on + strand, within BWI76_RS23750 at 4960.382 kb on - strand at 4960.415 kb on + strand at 4960.415 kb on + strand at 4960.559 kb on + strand at 4960.598 kb on + strand, within BWI76_RS23755 at 4960.687 kb on + strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.695 kb on - strand, within BWI76_RS23755 at 4960.766 kb on + strand, within BWI76_RS23755 at 4960.766 kb on + strand, within BWI76_RS23755 at 4960.874 kb on - strand at 4960.927 kb on - strand at 4961.000 kb on + strand at 4961.061 kb on - strand, within BWI76_RS23760 at 4961.138 kb on + strand at 4961.372 kb on - strand, within BWI76_RS23765 at 4961.383 kb on + strand, within BWI76_RS23765 at 4961.598 kb on + strand, within BWI76_RS23765 at 4961.710 kb on - strand, within BWI76_RS23765 at 4961.782 kb on - strand, within BWI76_RS23765 at 4961.822 kb on - strand, within BWI76_RS23765 at 4961.929 kb on - strand at 4961.931 kb on + strand at 4961.949 kb on + strand at 4961.983 kb on - strand at 4961.995 kb on - strand at 4962.020 kb on - strand at 4962.071 kb on + strand at 4962.076 kb on + strand at 4962.076 kb on + strand at 4962.076 kb on + strand at 4962.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 4,960,078 - +1.0 4,960,078 - BWI76_RS23750 0.69 -0.3 4,960,179 - BWI76_RS23750 0.76 -0.2 4,960,189 - BWI76_RS23750 0.77 +1.1 4,960,243 + BWI76_RS23750 0.81 -0.1 4,960,243 + BWI76_RS23750 0.81 +0.4 4,960,331 + BWI76_RS23750 0.88 +0.2 4,960,382 - -0.1 4,960,415 + -1.2 4,960,415 + +0.5 4,960,559 + -1.4 4,960,598 + BWI76_RS23755 0.18 +0.2 4,960,687 + BWI76_RS23755 0.43 +0.2 4,960,695 - BWI76_RS23755 0.45 -0.3 4,960,695 - BWI76_RS23755 0.45 -0.1 4,960,695 - BWI76_RS23755 0.45 +0.1 4,960,695 - BWI76_RS23755 0.45 +0.5 4,960,766 + BWI76_RS23755 0.66 -0.7 4,960,766 + BWI76_RS23755 0.66 +0.1 4,960,874 - -0.0 4,960,927 - -0.2 4,961,000 + +0.4 4,961,061 - BWI76_RS23760 0.20 -1.1 4,961,138 + -1.0 4,961,372 - BWI76_RS23765 0.24 -0.2 4,961,383 + BWI76_RS23765 0.25 +0.1 4,961,598 + BWI76_RS23765 0.55 +1.4 4,961,710 - BWI76_RS23765 0.70 +1.1 4,961,782 - BWI76_RS23765 0.80 -0.3 4,961,822 - BWI76_RS23765 0.86 +0.5 4,961,929 - +0.6 4,961,931 + +0.2 4,961,949 + -1.6 4,961,983 - -0.3 4,961,995 - -0.5 4,962,020 - -0.1 4,962,071 + +1.2 4,962,076 + -0.3 4,962,076 + -0.8 4,962,076 + +0.2 4,962,079 - -0.6
Or see this region's nucleotide sequence