Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17240 and BWI76_RS17245 are separated by 747 nucleotides BWI76_RS17245 and BWI76_RS17250 are separated by 478 nucleotides
BWI76_RS17240: BWI76_RS17240 - oligopeptide ABC transporter substrate-binding protein OppA, at 3,570,671 to 3,572,302
_RS17240
BWI76_RS17245: BWI76_RS17245 - hypothetical protein, at 3,573,050 to 3,573,697
_RS17245
BWI76_RS17250: BWI76_RS17250 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase, at 3,574,176 to 3,576,851
_RS17250
Position (kb)
3573
3574 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3572.200 kb on + strand at 3572.376 kb on + strand at 3572.383 kb on + strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.384 kb on - strand at 3572.391 kb on - strand at 3572.402 kb on - strand at 3572.648 kb on - strand at 3572.699 kb on + strand at 3572.852 kb on - strand at 3573.076 kb on + strand at 3573.124 kb on + strand, within BWI76_RS17245 at 3573.187 kb on - strand, within BWI76_RS17245 at 3573.261 kb on + strand, within BWI76_RS17245 at 3573.281 kb on + strand, within BWI76_RS17245 at 3573.404 kb on - strand, within BWI76_RS17245 at 3573.478 kb on + strand, within BWI76_RS17245 at 3573.496 kb on - strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.526 kb on + strand, within BWI76_RS17245 at 3573.534 kb on - strand, within BWI76_RS17245 at 3573.534 kb on - strand, within BWI76_RS17245 at 3573.545 kb on - strand, within BWI76_RS17245 at 3573.546 kb on - strand, within BWI76_RS17245 at 3573.582 kb on + strand, within BWI76_RS17245 at 3573.583 kb on + strand, within BWI76_RS17245 at 3573.613 kb on + strand, within BWI76_RS17245 at 3573.621 kb on - strand, within BWI76_RS17245 at 3573.627 kb on + strand, within BWI76_RS17245 at 3573.627 kb on + strand, within BWI76_RS17245 at 3573.635 kb on - strand at 3573.635 kb on - strand at 3573.635 kb on - strand at 3573.699 kb on - strand at 3573.806 kb on + strand at 3573.831 kb on - strand at 3573.874 kb on - strand at 3573.886 kb on - strand at 3573.914 kb on + strand at 3573.921 kb on + strand at 3573.977 kb on - strand at 3573.987 kb on - strand at 3573.992 kb on - strand at 3574.009 kb on - strand at 3574.009 kb on - strand at 3574.009 kb on - strand at 3574.109 kb on - strand at 3574.179 kb on - strand at 3574.209 kb on + strand at 3574.217 kb on - strand at 3574.217 kb on - strand at 3574.338 kb on + strand at 3574.513 kb on + strand, within BWI76_RS17250
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 3,572,200 + +0.2 3,572,376 + +0.3 3,572,383 + -0.2 3,572,384 - +1.0 3,572,384 - +1.0 3,572,384 - +0.6 3,572,384 - -1.2 3,572,384 - +0.1 3,572,391 - -0.2 3,572,402 - +0.4 3,572,648 - -0.5 3,572,699 + +0.8 3,572,852 - -0.6 3,573,076 + +0.6 3,573,124 + BWI76_RS17245 0.11 -0.7 3,573,187 - BWI76_RS17245 0.21 +0.7 3,573,261 + BWI76_RS17245 0.33 -0.4 3,573,281 + BWI76_RS17245 0.36 +0.5 3,573,404 - BWI76_RS17245 0.55 -2.2 3,573,478 + BWI76_RS17245 0.66 -0.2 3,573,496 - BWI76_RS17245 0.69 -0.0 3,573,526 + BWI76_RS17245 0.73 -0.1 3,573,526 + BWI76_RS17245 0.73 -0.2 3,573,526 + BWI76_RS17245 0.73 +0.4 3,573,534 - BWI76_RS17245 0.75 +0.6 3,573,534 - BWI76_RS17245 0.75 +0.3 3,573,545 - BWI76_RS17245 0.76 -0.9 3,573,546 - BWI76_RS17245 0.77 -0.6 3,573,582 + BWI76_RS17245 0.82 -0.1 3,573,583 + BWI76_RS17245 0.82 -0.7 3,573,613 + BWI76_RS17245 0.87 +0.0 3,573,621 - BWI76_RS17245 0.88 +0.0 3,573,627 + BWI76_RS17245 0.89 -0.1 3,573,627 + BWI76_RS17245 0.89 +0.6 3,573,635 - +0.4 3,573,635 - +0.2 3,573,635 - +0.7 3,573,699 - -0.2 3,573,806 + +0.1 3,573,831 - +2.0 3,573,874 - +0.2 3,573,886 - +1.5 3,573,914 + +0.3 3,573,921 + +0.3 3,573,977 - +1.0 3,573,987 - +0.1 3,573,992 - +0.2 3,574,009 - +0.0 3,574,009 - -0.3 3,574,009 - -0.4 3,574,109 - +2.7 3,574,179 - +2.9 3,574,209 + +0.2 3,574,217 - +0.1 3,574,217 - +0.9 3,574,338 + -0.4 3,574,513 + BWI76_RS17250 0.13 +0.9
Or see this region's nucleotide sequence