Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14890 and BWI76_RS14895 are separated by 11 nucleotides BWI76_RS14895 and BWI76_RS14900 are separated by 16 nucleotides
BWI76_RS14890: BWI76_RS14890 - carbohydrate kinase, at 3,119,700 to 3,121,238
_RS14890
BWI76_RS14895: BWI76_RS14895 - 3-oxoacyl-ACP reductase, at 3,121,250 to 3,122,011
_RS14895
BWI76_RS14900: BWI76_RS14900 - oxidoreductase, at 3,122,028 to 3,123,023
_RS14900
Position (kb)
3121
3122
3123 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3120.394 kb on - strand, within BWI76_RS14890 at 3120.643 kb on + strand, within BWI76_RS14890 at 3120.859 kb on - strand, within BWI76_RS14890 at 3120.909 kb on - strand, within BWI76_RS14890 at 3120.912 kb on + strand, within BWI76_RS14890 at 3121.380 kb on + strand, within BWI76_RS14895 at 3121.380 kb on + strand, within BWI76_RS14895 at 3121.533 kb on + strand, within BWI76_RS14895 at 3121.586 kb on - strand, within BWI76_RS14895 at 3121.691 kb on - strand, within BWI76_RS14895 at 3121.810 kb on - strand, within BWI76_RS14895 at 3121.821 kb on + strand, within BWI76_RS14895 at 3121.976 kb on + strand at 3121.982 kb on + strand at 3122.090 kb on - strand at 3122.188 kb on + strand, within BWI76_RS14900 at 3122.196 kb on - strand, within BWI76_RS14900 at 3122.348 kb on + strand, within BWI76_RS14900 at 3122.640 kb on + strand, within BWI76_RS14900 at 3122.681 kb on + strand, within BWI76_RS14900 at 3122.810 kb on + strand, within BWI76_RS14900 at 3122.818 kb on - strand, within BWI76_RS14900 at 3122.873 kb on - strand, within BWI76_RS14900 at 3122.883 kb on + strand, within BWI76_RS14900 at 3122.891 kb on - strand, within BWI76_RS14900 at 3122.927 kb on + strand at 3122.929 kb on - strand at 3122.935 kb on - strand at 3122.940 kb on - strand at 3122.940 kb on - strand at 3122.954 kb on - strand at 3122.964 kb on - strand at 3122.964 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 3,120,394 - BWI76_RS14890 0.45 +0.3 3,120,643 + BWI76_RS14890 0.61 +0.8 3,120,859 - BWI76_RS14890 0.75 -0.9 3,120,909 - BWI76_RS14890 0.79 -0.0 3,120,912 + BWI76_RS14890 0.79 -1.4 3,121,380 + BWI76_RS14895 0.17 -0.0 3,121,380 + BWI76_RS14895 0.17 +1.2 3,121,533 + BWI76_RS14895 0.37 +0.7 3,121,586 - BWI76_RS14895 0.44 +0.7 3,121,691 - BWI76_RS14895 0.58 -0.1 3,121,810 - BWI76_RS14895 0.73 +1.1 3,121,821 + BWI76_RS14895 0.75 +0.7 3,121,976 + +0.2 3,121,982 + -0.4 3,122,090 - +1.5 3,122,188 + BWI76_RS14900 0.16 +0.2 3,122,196 - BWI76_RS14900 0.17 +0.3 3,122,348 + BWI76_RS14900 0.32 +0.3 3,122,640 + BWI76_RS14900 0.61 -1.9 3,122,681 + BWI76_RS14900 0.66 +0.5 3,122,810 + BWI76_RS14900 0.79 -1.5 3,122,818 - BWI76_RS14900 0.79 +0.7 3,122,873 - BWI76_RS14900 0.85 +2.8 3,122,883 + BWI76_RS14900 0.86 -2.7 3,122,891 - BWI76_RS14900 0.87 +1.7 3,122,927 + -0.5 3,122,929 - +0.4 3,122,935 - -0.2 3,122,940 - -0.1 3,122,940 - +1.5 3,122,954 - +1.3 3,122,964 - +0.7 3,122,964 - -0.3
Or see this region's nucleotide sequence