Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09870 and BWI76_RS09875 are separated by 187 nucleotides BWI76_RS09875 and BWI76_RS09880 are separated by 591 nucleotides
BWI76_RS09870: BWI76_RS09870 - aromatic amino acid aminotransferase, at 2,072,816 to 2,074,006
_RS09870
BWI76_RS09875: BWI76_RS09875 - phosphoporin PhoE, at 2,074,194 to 2,075,273
_RS09875
BWI76_RS09880: BWI76_RS09880 - asparagine--tRNA ligase, at 2,075,865 to 2,077,265
_RS09880
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2073.464 kb on - strand, within BWI76_RS09870 at 2073.577 kb on + strand, within BWI76_RS09870 at 2073.605 kb on + strand, within BWI76_RS09870 at 2073.769 kb on + strand, within BWI76_RS09870 at 2073.866 kb on + strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.879 kb on + strand, within BWI76_RS09870 at 2073.995 kb on - strand at 2074.455 kb on - strand, within BWI76_RS09875 at 2074.528 kb on + strand, within BWI76_RS09875 at 2074.544 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.672 kb on - strand, within BWI76_RS09875 at 2074.845 kb on - strand, within BWI76_RS09875 at 2074.857 kb on + strand, within BWI76_RS09875 at 2074.865 kb on - strand, within BWI76_RS09875 at 2075.040 kb on - strand, within BWI76_RS09875 at 2075.401 kb on + strand at 2075.409 kb on - strand at 2075.751 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 2,073,464 - BWI76_RS09870 0.54 +1.0 2,073,577 + BWI76_RS09870 0.64 +0.7 2,073,605 + BWI76_RS09870 0.66 +0.9 2,073,769 + BWI76_RS09870 0.80 +0.9 2,073,866 + BWI76_RS09870 0.88 -0.1 2,073,874 - BWI76_RS09870 0.89 +0.0 2,073,874 - BWI76_RS09870 0.89 +0.1 2,073,874 - BWI76_RS09870 0.89 +0.3 2,073,879 + BWI76_RS09870 0.89 +1.0 2,073,995 - +1.6 2,074,455 - BWI76_RS09875 0.24 +1.9 2,074,528 + BWI76_RS09875 0.31 +2.1 2,074,544 - BWI76_RS09875 0.32 +2.2 2,074,557 - BWI76_RS09875 0.34 +2.1 2,074,557 - BWI76_RS09875 0.34 +2.2 2,074,672 - BWI76_RS09875 0.44 +2.4 2,074,845 - BWI76_RS09875 0.60 +1.7 2,074,857 + BWI76_RS09875 0.61 +2.4 2,074,865 - BWI76_RS09875 0.62 +2.1 2,075,040 - BWI76_RS09875 0.78 +2.4 2,075,401 + +2.1 2,075,409 - +1.5 2,075,751 + -2.2
Or see this region's nucleotide sequence