Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06785
Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.16 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,422,692 | - | BWI76_RS06780 | 0.57 | -3.7 | |
1,422,782 | - | BWI76_RS06780 | 0.64 | -3.1 | |
1,422,802 | + | BWI76_RS06780 | 0.66 | -2.0 | |
1,422,810 | - | BWI76_RS06780 | 0.67 | -2.9 | |
1,422,831 | - | BWI76_RS06780 | 0.69 | -4.3 | |
1,422,985 | + | BWI76_RS06780 | 0.81 | -3.1 | |
1,423,032 | + | BWI76_RS06780 | 0.85 | -1.8 | |
1,423,034 | - | BWI76_RS06780 | 0.86 | -3.0 | |
1,423,140 | - | -1.7 | |||
1,423,142 | + | -5.4 | |||
1,423,161 | + | -1.5 | |||
1,423,430 | + | BWI76_RS06785 | 0.13 | +2.4 | |
1,423,562 | - | BWI76_RS06785 | 0.33 | +1.3 | |
1,423,660 | + | BWI76_RS06785 | 0.48 | +1.6 | |
1,423,786 | - | BWI76_RS06785 | 0.67 | +1.5 | |
1,423,786 | - | BWI76_RS06785 | 0.67 | +1.5 | |
1,423,906 | - | BWI76_RS06785 | 0.86 | +1.7 | |
1,423,906 | - | BWI76_RS06785 | 0.86 | +1.2 | |
1,423,916 | - | BWI76_RS06785 | 0.87 | +1.7 | |
1,423,916 | - | BWI76_RS06785 | 0.87 | +1.1 | |
1,423,976 | + | +1.1 | |||
1,424,132 | - | +0.0 | |||
1,424,132 | - | -0.0 | |||
1,424,626 | + | BWI76_RS06790 | 0.15 | -0.4 | |
1,424,780 | - | BWI76_RS06790 | 0.19 | -0.4 | |
1,424,792 | - | BWI76_RS06790 | 0.20 | -0.1 | |
1,424,951 | + | BWI76_RS06790 | 0.25 | -1.3 |
Or see this region's nucleotide sequence