Experiment: Cephalothin 0.16 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02690 and BWI76_RS02695 overlap by 69 nucleotides BWI76_RS02695 and BWI76_RS02700 are separated by 305 nucleotides BWI76_RS02700 and BWI76_RS02705 are separated by 115 nucleotides BWI76_RS02705 and BWI76_RS02710 are separated by 82 nucleotides
BWI76_RS02690: BWI76_RS02690 - hypothetical protein, at 545,815 to 546,012
_RS02690
BWI76_RS02695: BWI76_RS02695 - peptidyl-prolyl cis-trans isomerase, at 545,944 to 546,564
_RS02695
BWI76_RS02700: BWI76_RS02700 - D-serine/D-alanine/glycine transporter, at 546,870 to 548,273
_RS02700
BWI76_RS02705: BWI76_RS02705 - iron-sulfur cluster repair di-iron protein, at 548,389 to 549,051
_RS02705
BWI76_RS02710: BWI76_RS02710 - EamA family transporter, at 549,134 to 550,105
_RS02710
Position (kb) 546
547
548
549 Strain fitness (log2 ratio) -1
0
1 at 545.966 kb on + strand at 546.155 kb on - strand, within BWI76_RS02695 at 546.318 kb on + strand, within BWI76_RS02695 at 546.480 kb on + strand, within BWI76_RS02695 at 546.480 kb on + strand, within BWI76_RS02695 at 546.519 kb on + strand at 546.597 kb on - strand at 546.621 kb on - strand at 546.708 kb on + strand at 546.792 kb on + strand at 546.804 kb on + strand at 546.806 kb on - strand at 546.841 kb on + strand at 546.879 kb on - strand at 546.889 kb on - strand at 546.889 kb on - strand at 546.905 kb on + strand at 546.913 kb on - strand at 546.982 kb on + strand at 547.000 kb on - strand at 547.250 kb on + strand, within BWI76_RS02700 at 547.258 kb on - strand, within BWI76_RS02700 at 547.541 kb on - strand, within BWI76_RS02700 at 547.549 kb on + strand, within BWI76_RS02700 at 547.559 kb on + strand, within BWI76_RS02700 at 547.683 kb on + strand, within BWI76_RS02700 at 547.698 kb on - strand, within BWI76_RS02700 at 547.784 kb on - strand, within BWI76_RS02700 at 547.825 kb on + strand, within BWI76_RS02700 at 547.833 kb on - strand at 547.835 kb on + strand, within BWI76_RS02700 at 547.848 kb on - strand at 547.924 kb on + strand, within BWI76_RS02700 at 548.096 kb on + strand, within BWI76_RS02700 at 548.120 kb on + strand, within BWI76_RS02700 at 548.215 kb on + strand at 548.218 kb on - strand at 548.258 kb on - strand at 548.408 kb on + strand at 548.408 kb on + strand at 548.519 kb on + strand, within BWI76_RS02705 at 548.554 kb on - strand, within BWI76_RS02705 at 548.615 kb on + strand, within BWI76_RS02705 at 548.615 kb on + strand, within BWI76_RS02705 at 548.684 kb on - strand, within BWI76_RS02705 at 548.701 kb on - strand, within BWI76_RS02705 at 549.182 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.16 mg/ml remove 545,966 + +1.6 546,155 - BWI76_RS02695 0.34 +1.1 546,318 + BWI76_RS02695 0.60 +0.9 546,480 + BWI76_RS02695 0.86 -0.2 546,480 + BWI76_RS02695 0.86 +0.3 546,519 + +0.1 546,597 - -0.3 546,621 - +1.0 546,708 + -0.4 546,792 + +0.5 546,804 + -0.3 546,806 - +0.1 546,841 + -1.4 546,879 - +0.1 546,889 - +0.2 546,889 - +0.5 546,905 + -0.6 546,913 - -0.2 546,982 + -0.2 547,000 - -1.4 547,250 + BWI76_RS02700 0.27 -0.5 547,258 - BWI76_RS02700 0.28 -0.2 547,541 - BWI76_RS02700 0.48 -1.4 547,549 + BWI76_RS02700 0.48 -0.7 547,559 + BWI76_RS02700 0.49 +0.2 547,683 + BWI76_RS02700 0.58 -0.1 547,698 - BWI76_RS02700 0.59 +0.3 547,784 - BWI76_RS02700 0.65 -1.4 547,825 + BWI76_RS02700 0.68 +0.0 547,833 - -0.2 547,835 + BWI76_RS02700 0.69 -0.1 547,848 - -0.4 547,924 + BWI76_RS02700 0.75 -0.3 548,096 + BWI76_RS02700 0.87 -1.0 548,120 + BWI76_RS02700 0.89 +0.2 548,215 + +0.8 548,218 - +0.2 548,258 - -0.5 548,408 + +0.6 548,408 + +0.5 548,519 + BWI76_RS02705 0.20 +0.2 548,554 - BWI76_RS02705 0.25 +0.2 548,615 + BWI76_RS02705 0.34 +0.0 548,615 + BWI76_RS02705 0.34 -0.1 548,684 - BWI76_RS02705 0.44 +0.1 548,701 - BWI76_RS02705 0.47 +0.3 549,182 + +0.1
Or see this region's nucleotide sequence