Strain Fitness in Pantoea sp. MT58 around IAI47_19100

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
46,417	-				-0.5
46,432	+				-1.1
46,432	+				-0.5
46,433	-				-0.6
46,433	-				-0.5
46,433	-				+0.8
46,435	+				+0.5
46,439	-				-0.2
46,483	+				-0.1
46,484	-				+0.9
46,484	-				-0.7
46,509	+				-0.6
46,509	+				+0.9
46,509	+				-1.1
46,509	+				-1.3
46,509	+				-0.5
46,509	+				+0.7
46,510	-				-0.5
46,510	-				+0.6
46,510	-				+0.5
46,510	-				+0.9
46,510	-				-0.2
46,510	-				-2.0
46,510	-				-1.5
46,529	-				-0.6
46,546	-				-0.3
46,546	-				-0.1
46,559	-				-0.2
46,559	-				+2.5
46,559	-				+1.1
46,578	+				-0.6
46,585	-				+0.1
46,585	-				+0.2
46,585	-				-1.8
46,585	-				-0.7
46,587	+				-0.8
46,588	-				+0.7
46,633	+				-0.2
46,650	+				-0.5
46,650	+				+0.2
46,650	+				+0.4
46,664	+				+1.3
46,665	-				-2.0
46,706	+		IAI47_19095	0.10	+1.0
46,750	+		IAI47_19095	0.19	-0.1
46,750	+		IAI47_19095	0.19	-1.0
46,750	+		IAI47_19095	0.19	-1.8
46,750	+		IAI47_19095	0.19	-0.3
46,751	-		IAI47_19095	0.19	+0.7
46,777	-		IAI47_19095	0.25	-0.8
46,777	-		IAI47_19095	0.25	+0.4
46,781	+		IAI47_19095	0.26	-0.5
46,781	+		IAI47_19095	0.26	-0.7
46,782	-		IAI47_19095	0.26	+1.5
46,782	-		IAI47_19095	0.26	-0.4
46,808	+		IAI47_19095	0.31	-0.3
46,808	+		IAI47_19095	0.31	+2.7
46,808	+		IAI47_19095	0.31	-0.6
46,829	+		IAI47_19095	0.35	+1.7
46,829	+		IAI47_19095	0.35	-0.1
46,829	+		IAI47_19095	0.35	-0.3
46,830	-		IAI47_19095	0.36	+0.9
46,830	-		IAI47_19095	0.36	+1.2
46,867	-		IAI47_19095	0.43	+1.1
46,877	+		IAI47_19095	0.45	-0.8
46,879	+		IAI47_19095	0.46	-1.0
46,879	+		IAI47_19095	0.46	-2.1
46,880	-		IAI47_19095	0.46	+0.0
46,889	+		IAI47_19095	0.48	-1.2
46,890	-		IAI47_19095	0.48	+0.5
46,905	-		IAI47_19095	0.51	-0.3
46,954	+		IAI47_19095	0.61	-0.3
46,954	+		IAI47_19095	0.61	+0.9
46,954	+		IAI47_19095	0.61	-0.3
46,954	+		IAI47_19095	0.61	-2.0
46,954	+		IAI47_19095	0.61	-0.7
46,955	-		IAI47_19095	0.61	-0.7
46,955	-		IAI47_19095	0.61	-2.1
46,955	-		IAI47_19095	0.61	+0.5
46,955	-		IAI47_19095	0.61	+1.5
46,955	-		IAI47_19095	0.61	-0.0
46,964	+		IAI47_19095	0.63	-1.1
46,965	-		IAI47_19095	0.63	-0.5
46,965	-		IAI47_19095	0.63	+2.2
46,965	-		IAI47_19095	0.63	+0.2
46,995	-		IAI47_19095	0.69	+0.7
46,995	-		IAI47_19095	0.69	-0.2
47,005	+		IAI47_19095	0.71	-0.8
47,006	-		IAI47_19095	0.72	-0.9
47,006	-		IAI47_19095	0.72	-0.8
47,006	-		IAI47_19095	0.72	+0.5
47,006	-		IAI47_19095	0.72	-2.8
47,006	-		IAI47_19095	0.72	+1.3
47,006	-		IAI47_19095	0.72	+1.3
47,009	+		IAI47_19095	0.72	+0.3
47,009	+		IAI47_19095	0.72	+0.3
47,009	+		IAI47_19095	0.72	-0.5
47,009	+		IAI47_19095	0.72	-0.0
47,010	-		IAI47_19095	0.72	+0.5
47,010	-		IAI47_19095	0.72	-0.4
47,010	-		IAI47_19095	0.72	+1.0
47,024	+		IAI47_19095	0.75	+0.3
47,024	+		IAI47_19095	0.75	-0.3
47,025	-		IAI47_19095	0.75	+0.1
47,025	-		IAI47_19095	0.75	+1.3
47,025	-		IAI47_19095	0.75	+2.3
47,050	+		IAI47_19095	0.81	-0.4
47,051	-		IAI47_19095	0.81	+1.0
47,123	+				+1.5
47,123	+				+0.2
47,124	-				-0.3
47,178	+				+0.1
47,178	+				+1.3
47,178	+				+0.1
47,178	+				+2.5
47,178	+				+1.1
47,178	+				+2.5
47,178	+				+1.2
47,179	-				-0.1
47,179	-				-0.3
47,185	+				-0.5
47,185	+				-0.8
47,185	+				-0.4
47,186	-				-0.1
47,186	-				-0.5
47,186	-				+0.2
47,193	+				-0.3
47,193	+				-1.4
47,193	+				-0.1
47,193	+				+0.4
47,193	+				+0.7
47,194	-				+1.3
47,194	-				+0.9
47,194	-				-1.5
47,194	-				-1.4
47,194	-				+0.4
47,216	+				+1.3
47,217	-				+0.3
47,217	-				+0.9
47,217	-				-0.5
47,223	+				-1.1
47,223	+				+0.0
47,223	+				-1.8
47,223	+				-1.0
47,223	+				-0.7
47,223	+				+0.0
47,223	+				-1.5
47,223	+				-0.1
47,223	+				-0.6
47,223	+				-0.3
47,224	-				-2.2
47,224	-				-0.3
47,224	-				-0.3
47,224	-				-0.1
47,224	-				+1.0
47,224	-				-0.2
47,224	-				+1.2
47,224	-				+1.5
47,224	-				+0.7
47,224	-				-0.7
47,224	-				+3.6
47,224	-				+0.1
47,224	-				+0.0
47,227	+				-1.0
47,227	+				-0.6
47,227	+				-0.3
47,227	+				+0.9
47,227	+				-0.4
47,228	-				+0.6
47,228	-				+1.0
47,228	-				-0.3
47,228	-				-0.8
47,228	-				+0.1
47,229	+				+1.2
47,230	-				+0.5
47,230	-				+0.7
47,230	-				+2.5
47,230	-				-0.3
47,320	-				-1.1
47,320	-				+0.0
47,320	-				+1.4
47,325	-				-1.2
47,342	+				-1.4
47,342	+				-1.3
47,342	+				-0.8
47,342	+				-0.4
47,343	-				-0.5
47,343	-				+0.1
47,343	-				-1.1
47,343	-				-0.3
47,343	-				-0.1
47,347	+				+0.2
47,347	+				-1.5
47,347	+				-0.8
47,347	+				-0.8
47,347	+				+0.1
47,347	+				+1.2
47,347	+				-2.0
47,348	-				+0.8
47,348	-				-1.1
47,348	-				+0.0
47,348	-				-0.3
47,348	-				-0.6
47,348	-				-1.2
47,368	+				+0.9
47,368	+				-0.9
47,395	+				+0.7
47,398	+				-0.3
47,433	-				-1.0
47,465	-				-1.1
47,465	-				-2.4
47,465	-				-2.0
47,465	-				+0.5
47,465	-				-0.1
47,477	+				-0.5
47,477	+				-1.7
47,478	-				-0.5
47,478	-				-0.1
47,508	+		IAI47_19100	0.10	+0.2
47,508	+		IAI47_19100	0.10	-0.1
47,508	+		IAI47_19100	0.10	+0.7
47,508	+		IAI47_19100	0.10	+2.1
47,508	+		IAI47_19100	0.10	-1.5
47,508	+		IAI47_19100	0.10	-0.8
47,508	+		IAI47_19100	0.10	+0.8
47,508	+		IAI47_19100	0.10	+2.2
47,508	+		IAI47_19100	0.10	+0.2
47,509	-		IAI47_19100	0.11	+1.1
47,509	-		IAI47_19100	0.11	+0.6
47,509	-		IAI47_19100	0.11	-0.6
47,509	-		IAI47_19100	0.11	+0.1
47,509	-		IAI47_19100	0.11	-1.7
47,509	-		IAI47_19100	0.11	-1.4
47,509	-		IAI47_19100	0.11	-1.5
47,509	-		IAI47_19100	0.11	+0.1
47,509	-		IAI47_19100	0.11	-0.1
47,509	-		IAI47_19100	0.11	-0.5
47,509	-		IAI47_19100	0.11	-0.5
47,509	-		IAI47_19100	0.11	+0.7
47,509	-		IAI47_19100	0.11	-0.2
47,510	+		IAI47_19100	0.11	+0.5
47,510	+		IAI47_19100	0.11	-1.0
47,510	+		IAI47_19100	0.11	-0.7
47,510	+		IAI47_19100	0.11	+0.5
47,510	+		IAI47_19100	0.11	-0.7
47,510	+		IAI47_19100	0.11	-1.5
47,511	-		IAI47_19100	0.11	+0.6
47,511	-		IAI47_19100	0.11	+0.1
47,511	-		IAI47_19100	0.11	-1.1
47,511	-		IAI47_19100	0.11	-0.5
47,511	-		IAI47_19100	0.11	-0.5
47,511	-		IAI47_19100	0.11	-0.8
47,511	-		IAI47_19100	0.11	+0.9
47,511	-		IAI47_19100	0.11	-1.1
47,511	-		IAI47_19100	0.11	-0.3
47,511	-		IAI47_19100	0.11	-0.6
47,511	-		IAI47_19100	0.11	+0.6
47,511	-		IAI47_19100	0.11	-1.1
47,512	+		IAI47_19100	0.11	-0.3
47,512	+		IAI47_19100	0.11	-0.9
47,512	+		IAI47_19100	0.11	+0.2
47,512	+		IAI47_19100	0.11	-0.6
47,512	+		IAI47_19100	0.11	-0.1
47,513	-		IAI47_19100	0.11	+0.7
47,513	-		IAI47_19100	0.11	-1.3
47,513	-		IAI47_19100	0.11	-1.0
47,513	-		IAI47_19100	0.11	-0.6
47,520	+		IAI47_19100	0.12	-2.6
47,520	+		IAI47_19100	0.12	-1.4
47,520	+		IAI47_19100	0.12	+0.2
47,520	+		IAI47_19100	0.12	-1.3
47,521	-		IAI47_19100	0.12	+0.8
47,521	-		IAI47_19100	0.12	-1.2
47,521	-		IAI47_19100	0.12	-0.7
47,521	-		IAI47_19100	0.12	-1.6
47,557	+		IAI47_19100	0.16	+1.9
47,557	+		IAI47_19100	0.16	+0.5
47,557	+		IAI47_19100	0.16	-0.1
47,557	+		IAI47_19100	0.16	-0.1
47,558	-		IAI47_19100	0.16	+0.6
47,560	-		IAI47_19100	0.16	+1.2
47,560	-		IAI47_19100	0.16	-0.4
47,560	-		IAI47_19100	0.16	-0.3
47,576	+		IAI47_19100	0.18	+0.7
47,576	+		IAI47_19100	0.18	-2.3
47,576	+		IAI47_19100	0.18	+2.0
47,592	+		IAI47_19100	0.20	+0.3
47,626	+		IAI47_19100	0.23	+0.2
47,626	+		IAI47_19100	0.23	-1.3
47,640	+		IAI47_19100	0.25	-1.4
47,640	+		IAI47_19100	0.25	+1.0
47,641	-		IAI47_19100	0.25	+1.3
47,651	+		IAI47_19100	0.26	+2.8
47,651	+		IAI47_19100	0.26	+0.2
47,726	+		IAI47_19100	0.34	-0.5
47,726	+		IAI47_19100	0.34	+0.3
47,727	-		IAI47_19100	0.34	+0.3
47,727	-		IAI47_19100	0.34	-0.5
47,727	-		IAI47_19100	0.34	-0.7
47,739	+		IAI47_19100	0.36	-0.3
47,739	+		IAI47_19100	0.36	-0.9
47,740	-		IAI47_19100	0.36	-1.4
47,757	-		IAI47_19100	0.38	-0.7
47,814	+		IAI47_19100	0.44	-0.0
47,814	+		IAI47_19100	0.44	+0.2
47,819	+		IAI47_19100	0.44	-0.2
47,819	+		IAI47_19100	0.44	-1.5
47,820	-		IAI47_19100	0.45	+0.3
47,826	+		IAI47_19100	0.45	-0.8
47,826	+		IAI47_19100	0.45	-0.0
47,826	+		IAI47_19100	0.45	+0.2
47,876	-		IAI47_19100	0.51	+0.2
47,950	+		IAI47_19100	0.59	+0.5
47,951	-		IAI47_19100	0.59	-0.5
47,991	-		IAI47_19100	0.63	-1.0
47,998	+		IAI47_19100	0.64	-0.4
47,998	+		IAI47_19100	0.64	-0.6
48,054	+		IAI47_19100	0.70	+0.7
48,054	+		IAI47_19100	0.70	-0.9
48,055	-		IAI47_19100	0.70	+0.5
48,055	-		IAI47_19100	0.70	+0.2
48,056	+		IAI47_19100	0.70	-0.9
48,057	-		IAI47_19100	0.70	-0.5
48,057	-		IAI47_19100	0.70	-0.8
48,057	-		IAI47_19100	0.70	+1.1
48,062	+		IAI47_19100	0.71	+1.1
48,062	+		IAI47_19100	0.71	+0.2
48,063	-		IAI47_19100	0.71	+0.7
48,063	-		IAI47_19100	0.71	-1.2
48,063	-		IAI47_19100	0.71	-1.1
48,065	+		IAI47_19100	0.71	+0.7
48,065	+		IAI47_19100	0.71	+1.7
48,065	+		IAI47_19100	0.71	-1.0
48,065	+		IAI47_19100	0.71	-0.3
48,065	+		IAI47_19100	0.71	-0.7
48,080	+		IAI47_19100	0.73	+0.2
48,089	+		IAI47_19100	0.74	+1.5
48,090	-		IAI47_19100	0.74	+0.3
48,128	-		IAI47_19100	0.78	+1.3
48,166	+		IAI47_19100	0.82	+0.2
48,211	+		IAI47_19100	0.87	-0.1
48,252	-				-0.1
48,262	+				-1.0
48,262	+				-0.4
48,262	+				+1.0
48,270	-				-0.8
48,312	+				+0.5
48,312	+				+1.5
48,313	-				-0.5
48,324	+				-0.7
48,324	+				+0.5
48,324	+				+1.3
48,324	+				-0.3
48,324	+				+0.2
48,324	+				+0.2
48,324	+				-0.5
48,325	-				-0.5
48,325	-				-0.4
48,325	-				+1.3
48,325	-				+0.2
48,325	-				+0.5
48,325	-				-0.2
48,325	-				+2.3
48,325	-				-0.3
48,329	-				-0.6
48,329	-				+0.7
48,335	+				+0.9
48,367	+				+1.2
48,368	-				-1.1
48,368	-				+0.0
48,393	+				+0.3
48,397	+				-1.3
48,397	+				-1.8
48,397	+				+0.6
48,397	+				+0.8
48,398	-				-0.7
48,398	-				-1.4
48,398	-				+0.2
48,398	-				+0.7
48,398	-				-0.3
48,398	-				-0.3
48,398	-				-2.4
48,398	-				+0.7
48,398	-				+0.1
48,399	+				-0.4
48,399	+				-1.3
48,400	-				-0.9
48,400	-				+0.4
48,400	-				-0.1
48,400	-				-1.1
48,492	+				-0.1
48,492	+				+0.4
48,492	+				+1.4
48,493	-				+0.1
48,496	+				+0.1
48,496	+				+0.0
48,496	+				+0.2
48,497	-				-0.3
48,497	-				+1.3
48,497	-				+1.0
48,497	-				+2.0
48,527	+				-1.8
48,528	-				+0.7
48,528	-				+1.1
48,528	-				-0.6
48,541	+				-1.9
48,541	+				-0.4
48,541	+				+0.3
48,541	+				-0.2
48,541	+				-1.5
48,542	-				+0.5
48,542	-				+0.2
48,542	-				-0.5
48,542	-				-0.7
48,542	-				+0.5
48,542	-				-0.3
48,590	+				-0.7
48,591	-				-0.6
48,657	+				+1.5
48,657	+				-0.1
48,660	+				+0.6
48,696	+				-2.5
48,696	+				-2.3
48,696	+				+0.4
48,696	+				+1.2
48,730	+				+0.0
48,730	+				-1.8
48,730	+				-0.5
48,731	-				+0.7
48,733	+				+1.2
48,734	-				-1.2
48,734	-				+0.4
48,736	+				-1.0
48,736	+				+2.7
48,737	-				-0.1
48,738	+				+0.4
48,738	+				+0.3
48,739	-				-0.3
48,739	-				+0.8
48,742	+				-0.4
48,756	+				+0.7
48,757	-		IAI47_19105	0.10	-0.8
48,811	-		IAI47_19105	0.19	+1.1
48,817	+		IAI47_19105	0.20	-0.1
48,837	+		IAI47_19105	0.24	+0.7
48,837	+		IAI47_19105	0.24	-0.4
48,837	+		IAI47_19105	0.24	+1.1
48,838	-		IAI47_19105	0.24	+0.6
48,842	+		IAI47_19105	0.25	+0.2
48,869	-		IAI47_19105	0.29	+0.5
48,869	-		IAI47_19105	0.29	+0.9
48,875	+		IAI47_19105	0.30	-0.7
48,875	+		IAI47_19105	0.30	-0.7
48,956	-		IAI47_19105	0.44	+0.9
48,956	-		IAI47_19105	0.44	+0.1
48,956	-		IAI47_19105	0.44	+0.4
48,956	-		IAI47_19105	0.44	+1.5
48,973	-		IAI47_19105	0.47	-0.1
48,973	-		IAI47_19105	0.47	-0.8
49,004	+		IAI47_19105	0.53	-0.3
49,017	+		IAI47_19105	0.55	+1.8
49,017	+		IAI47_19105	0.55	+0.3
49,017	+		IAI47_19105	0.55	-0.7
49,018	-		IAI47_19105	0.55	-1.0
49,048	+		IAI47_19105	0.60	-1.8
49,048	+		IAI47_19105	0.60	-0.1
49,048	+		IAI47_19105	0.60	+0.5
49,049	-		IAI47_19105	0.60	-0.0
49,049	-		IAI47_19105	0.60	-1.0
49,049	-		IAI47_19105	0.60	-1.9
49,049	-		IAI47_19105	0.60	-2.0
49,056	+		IAI47_19105	0.62	-0.7
49,056	+		IAI47_19105	0.62	-0.5
49,066	+		IAI47_19105	0.63	+0.2
49,066	+		IAI47_19105	0.63	-0.1
49,067	-		IAI47_19105	0.63	-1.7
49,067	-		IAI47_19105	0.63	-0.5
49,067	-		IAI47_19105	0.63	+0.2
49,067	-		IAI47_19105	0.63	-1.5
49,109	-		IAI47_19105	0.71	+0.8
49,129	+		IAI47_19105	0.74	-0.8
49,129	+		IAI47_19105	0.74	+0.8
49,131	+		IAI47_19105	0.74	-0.8
49,131	+		IAI47_19105	0.74	-0.2
49,132	-		IAI47_19105	0.75	+1.0
49,132	-		IAI47_19105	0.75	+0.9
49,132	-		IAI47_19105	0.75	+0.2
49,132	-		IAI47_19105	0.75	+0.3
49,132	-		IAI47_19105	0.75	+1.9
49,173	+		IAI47_19105	0.82	-0.7
49,174	-		IAI47_19105	0.82	-1.7
49,204	-		IAI47_19105	0.87	-2.5
49,204	-		IAI47_19105	0.87	-0.3
49,277	+				+1.5
49,278	-				-0.0
49,278	-				+0.3
49,297	-				-0.2
49,297	-				-1.0
49,297	-				+0.7
49,305	+				+0.5
49,305	+				-1.1
49,305	+				+1.4
49,306	-				-2.4
49,306	-				+0.0
49,306	-				-0.5
49,306	-				+1.4
49,306	-				+1.6
49,314	-				+0.4
49,314	-				+0.6