Strain Fitness in Pantoea sp. MT58 around IAI47_17415

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
3,688,919	-		IAI47_17410	0.59	+0.2
3,688,919	-		IAI47_17410	0.59	+1.2
3,688,932	+		IAI47_17410	0.60	-0.0
3,688,978	+		IAI47_17410	0.62	-1.1
3,688,978	+		IAI47_17410	0.62	+0.2
3,689,003	-		IAI47_17410	0.63	+0.6
3,689,137	+		IAI47_17410	0.68	-0.8
3,689,146	+		IAI47_17410	0.69	-1.4
3,689,147	-		IAI47_17410	0.69	+0.7
3,689,193	+		IAI47_17410	0.71	-0.5
3,689,193	+		IAI47_17410	0.71	-0.0
3,689,193	+		IAI47_17410	0.71	+1.5
3,689,194	-		IAI47_17410	0.71	-1.4
3,689,238	-		IAI47_17410	0.72	+0.9
3,689,347	+		IAI47_17410	0.77	-2.4
3,689,347	+		IAI47_17410	0.77	-0.2
3,689,348	-		IAI47_17410	0.77	+1.3
3,689,348	-		IAI47_17410	0.77	-2.9
3,689,348	-		IAI47_17410	0.77	+1.3
3,689,389	+		IAI47_17410	0.79	-1.4
3,689,389	+		IAI47_17410	0.79	-0.7
3,689,389	+		IAI47_17410	0.79	-0.2
3,689,389	+		IAI47_17410	0.79	-0.1
3,689,389	+		IAI47_17410	0.79	-0.1
3,689,389	+		IAI47_17410	0.79	+0.1
3,689,389	+		IAI47_17410	0.79	+0.1
3,689,390	-		IAI47_17410	0.79	-0.6
3,689,390	-		IAI47_17410	0.79	+0.3
3,689,390	-		IAI47_17410	0.79	-1.9
3,689,390	-		IAI47_17410	0.79	+3.5
3,689,390	-		IAI47_17410	0.79	+0.3
3,689,390	-		IAI47_17410	0.79	+1.6
3,689,390	-		IAI47_17410	0.79	+0.1
3,689,390	-		IAI47_17410	0.79	+0.7
3,689,390	-		IAI47_17410	0.79	+1.9
3,689,390	-		IAI47_17410	0.79	-0.0
3,689,390	-		IAI47_17410	0.79	-0.1
3,689,390	-		IAI47_17410	0.79	-0.9
3,689,390	-		IAI47_17410	0.79	+0.5
3,689,398	+		IAI47_17410	0.79	+2.6
3,689,399	-		IAI47_17410	0.79	-0.7
3,689,399	-		IAI47_17410	0.79	+0.1
3,689,399	-		IAI47_17410	0.79	+0.1
3,689,399	-		IAI47_17410	0.79	-1.6
3,689,454	+		IAI47_17410	0.81	-0.6
3,689,454	+		IAI47_17410	0.81	-0.4
3,689,454	+		IAI47_17410	0.81	-0.7
3,689,454	+		IAI47_17410	0.81	+1.2
3,689,455	-		IAI47_17410	0.81	-0.4
3,689,455	-		IAI47_17410	0.81	+3.2
3,689,455	-		IAI47_17410	0.81	+0.5
3,689,455	-		IAI47_17410	0.81	+0.5
3,689,455	-		IAI47_17410	0.81	+3.7
3,689,455	-		IAI47_17410	0.81	+1.7
3,689,455	-		IAI47_17410	0.81	+0.7
3,689,455	-		IAI47_17410	0.81	-1.3
3,689,455	-		IAI47_17410	0.81	-0.6
3,689,455	-		IAI47_17410	0.81	+1.3
3,689,455	-		IAI47_17410	0.81	-0.1
3,689,455	-		IAI47_17410	0.81	+1.5
3,689,530	+		IAI47_17410	0.84	-2.3
3,689,530	+		IAI47_17410	0.84	-0.3
3,689,530	+		IAI47_17410	0.84	-0.2
3,689,530	+		IAI47_17410	0.84	-0.3
3,689,531	-		IAI47_17410	0.84	+1.3
3,689,531	-		IAI47_17410	0.84	-0.8
3,689,531	-		IAI47_17410	0.84	-1.5
3,689,531	-		IAI47_17410	0.84	+0.6
3,689,531	-		IAI47_17410	0.84	-1.3
3,689,532	+		IAI47_17410	0.84	-0.7
3,689,532	+		IAI47_17410	0.84	-1.9
3,689,532	+		IAI47_17410	0.84	-0.9
3,689,533	-		IAI47_17410	0.85	-0.5
3,689,533	-		IAI47_17410	0.85	+0.7
3,689,533	-		IAI47_17410	0.85	+1.5
3,689,535	+		IAI47_17410	0.85	-0.9
3,689,535	+		IAI47_17410	0.85	-0.9
3,689,535	+		IAI47_17410	0.85	-0.9
3,689,535	+		IAI47_17410	0.85	+0.9
3,689,535	+				+0.9
3,689,536	-		IAI47_17410	0.85	-1.3
3,689,536	-		IAI47_17410	0.85	+0.3
3,689,536	-		IAI47_17410	0.85	-0.8
3,689,536	-		IAI47_17410	0.85	-0.9
3,689,542	-		IAI47_17410	0.85	-0.9
3,689,542	-		IAI47_17410	0.85	-1.4
3,689,542	-		IAI47_17410	0.85	-0.3
3,689,544	+		IAI47_17410	0.85	-0.1
3,689,544	+		IAI47_17410	0.85	-1.6
3,689,544	+		IAI47_17410	0.85	+0.4
3,689,545	-		IAI47_17410	0.85	-0.2
3,689,545	-		IAI47_17410	0.85	+1.1
3,689,545	-		IAI47_17410	0.85	+2.6
3,689,545	-		IAI47_17410	0.85	+0.0
3,689,545	-		IAI47_17410	0.85	+1.3
3,689,545	-		IAI47_17410	0.85	+0.5
3,689,545	-		IAI47_17410	0.85	+0.6
3,689,545	-		IAI47_17410	0.85	-0.3
3,689,545	-		IAI47_17410	0.85	+0.3
3,689,591	+		IAI47_17410	0.87	-0.4
3,689,592	-		IAI47_17410	0.87	+0.6
3,689,592	-		IAI47_17410	0.87	-0.8
3,689,592	-		IAI47_17410	0.87	+1.5
3,689,592	-		IAI47_17410	0.87	+1.3
3,689,594	+		IAI47_17410	0.87	-0.5
3,689,594	+		IAI47_17410	0.87	+0.5
3,689,594	+		IAI47_17410	0.87	+0.2
3,689,595	-		IAI47_17410	0.87	+0.1
3,689,621	-		IAI47_17410	0.88	+1.3
3,689,623	+		IAI47_17410	0.88	-0.7
3,689,623	+		IAI47_17410	0.88	-0.0
3,689,623	+		IAI47_17410	0.88	-1.7
3,689,623	+		IAI47_17410	0.88	-1.1
3,689,624	-		IAI47_17410	0.88	-0.8
3,689,672	-				-0.5
3,689,672	-				+1.7
3,689,672	-				-0.5
3,689,672	-				+1.2
3,689,672	-				-3.0
3,689,672	-				+0.3
3,689,672	-				+0.3
3,689,672	-				+0.9
3,689,673	+				-2.3
3,689,673	+				+0.7
3,689,673	+				-2.0
3,689,673	+				+0.5
3,689,673	+				-0.9
3,689,673	+				+0.6
3,689,674	-				-0.3
3,689,674	-				-0.3
3,689,674	-				-1.0
3,689,674	-				+0.6
3,689,674	-				+1.7
3,689,674	-				+1.0
3,689,674	-				+0.2
3,689,675	+				+1.9
3,689,675	+				-0.1
3,689,675	+				+1.6
3,689,675	+				+0.3
3,689,675	+				-0.3
3,689,676	-				-2.0
3,689,676	-				+3.3
3,689,676	-				-1.4
3,689,676	-				-1.2
3,689,676	-				+1.5
3,689,676	-				+0.8
3,689,686	+				-0.5
3,689,687	-				-0.3
3,689,687	-				-0.0
3,689,692	+				+0.3
3,689,693	-				+2.3
3,689,721	-				+1.4
3,689,722	+				-0.1
3,689,722	+				-0.1
3,689,723	-				+0.1
3,689,723	-				+2.0
3,689,723	-				-1.5
3,689,723	-				-0.1
3,689,734	+				-0.0
3,689,734	+				+0.6
3,689,735	-				-0.0
3,689,735	-				-0.6
3,689,825	-				-0.6
3,690,085	-		IAI47_17415	0.35	-1.0
3,690,087	+		IAI47_17415	0.35	-0.7
3,690,087	+		IAI47_17415	0.35	+0.7
3,690,088	-		IAI47_17415	0.36	-2.4
3,690,088	-		IAI47_17415	0.36	+1.6
3,690,088	-		IAI47_17415	0.36	-0.5
3,690,088	-		IAI47_17415	0.36	-1.8
3,690,126	+		IAI47_17415	0.43	-1.2
3,690,154	-		IAI47_17415	0.48	-2.0
3,690,222	-		IAI47_17415	0.61	-1.6
3,690,222	-		IAI47_17415	0.61	-3.8
3,690,222	-		IAI47_17415	0.61	-3.2
3,690,222	-		IAI47_17415	0.61	-2.5
3,690,222	-		IAI47_17415	0.61	-2.8
3,690,222	-		IAI47_17415	0.61	-3.3
3,690,258	+		IAI47_17415	0.68	+1.9
3,690,258	+		IAI47_17415	0.68	-0.5
3,690,258	+		IAI47_17415	0.68	+2.3
3,690,258	+		IAI47_17415	0.68	+0.5
3,690,258	+		IAI47_17415	0.68	-0.9
3,690,313	-		IAI47_17415	0.78	-2.3
3,690,313	-		IAI47_17415	0.78	-3.8
3,690,313	-		IAI47_17415	0.78	-1.3
3,690,329	-		IAI47_17415	0.81	-2.1
3,690,329	-		IAI47_17415	0.81	-2.9
3,690,329	-		IAI47_17415	0.81	-2.6
3,690,329	-		IAI47_17415	0.81	-3.2
3,690,329	-		IAI47_17415	0.81	-2.0
3,690,329	-		IAI47_17415	0.81	-4.2
3,690,545	+				-2.5
3,690,699	-				-0.9
3,690,699	-				-2.8
3,690,741	+				+0.5
3,690,741	+				+0.6
3,690,741	+				+2.5
3,690,749	+				-0.6
3,690,781	-		IAI47_17420	0.16	-4.1
3,690,781	-		IAI47_17420	0.16	-1.1
3,690,781	-		IAI47_17420	0.16	-2.0
3,690,781	-		IAI47_17420	0.16	-1.1
3,690,781	-		IAI47_17420	0.16	-2.2
3,690,843	+		IAI47_17420	0.27	-0.3
3,690,843	+		IAI47_17420	0.27	-0.2
3,690,845	+		IAI47_17420	0.28	-0.4
3,690,845	+		IAI47_17420	0.28	+1.7
3,690,845	+		IAI47_17420	0.28	+0.2
3,690,845	+		IAI47_17420	0.28	-2.3
3,690,882	+		IAI47_17420	0.35	-0.0
3,690,883	-		IAI47_17420	0.35	-1.7
3,690,883	-		IAI47_17420	0.35	+0.5
3,690,885	+		IAI47_17420	0.35	+0.7
3,690,885	+		IAI47_17420	0.35	-1.4
3,690,885	+		IAI47_17420	0.35	-0.6
3,690,885	+		IAI47_17420	0.35	-0.8
3,690,885	+		IAI47_17420	0.35	-0.5
3,690,886	-		IAI47_17420	0.35	-1.4
3,690,886	-		IAI47_17420	0.35	-2.9
3,690,886	-		IAI47_17420	0.35	-2.5
3,690,886	-		IAI47_17420	0.35	-1.7
3,690,886	-		IAI47_17420	0.35	-3.3
3,690,886	-		IAI47_17420	0.35	-1.9
3,690,886	-		IAI47_17420	0.35	-1.3
3,690,886	-		IAI47_17420	0.35	-3.5
3,690,886	-		IAI47_17420	0.35	-3.2
3,690,914	+		IAI47_17420	0.41	+1.1
3,690,915	-		IAI47_17420	0.41	-2.0
3,690,918	+		IAI47_17420	0.41	-0.9
3,690,918	+		IAI47_17420	0.41	-0.5
3,690,918	+		IAI47_17420	0.41	-1.3
3,690,918	+		IAI47_17420	0.41	+2.4
3,690,918	+		IAI47_17420	0.41	-0.0
3,690,919	-		IAI47_17420	0.42	-1.9
3,690,924	+		IAI47_17420	0.43	-1.6
3,690,925	-		IAI47_17420	0.43	-2.8
3,690,925	-		IAI47_17420	0.43	-0.5
3,691,056	+		IAI47_17420	0.67	-1.7
3,691,056	+		IAI47_17420	0.67	-1.8
3,691,056	+		IAI47_17420	0.67	+0.2
3,691,056	+		IAI47_17420	0.67	-0.9
3,691,056	+		IAI47_17420	0.67	+0.1
3,691,063	+		IAI47_17420	0.69	+1.5
3,691,063	+		IAI47_17420	0.69	-0.3
3,691,063	+		IAI47_17420	0.69	-0.5
3,691,063	+		IAI47_17420	0.69	-1.7
3,691,063	+		IAI47_17420	0.69	+0.2
3,691,063	+		IAI47_17420	0.69	-2.5
3,691,063	+		IAI47_17420	0.69	+0.0
3,691,063	+		IAI47_17420	0.69	-0.5
3,691,063	+		IAI47_17420	0.69	-1.4
3,691,063	+		IAI47_17420	0.69	+0.1
3,691,111	-		IAI47_17420	0.78	-2.5
3,691,111	-		IAI47_17420	0.78	-4.1
3,691,205	-				-3.6
3,691,205	-				-2.6
3,691,340	+				+1.1