Strain Fitness in Pantoea sp. MT58 around IAI47_11635

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,465,757	-				-0.9
2,465,757	-				+1.3
2,465,783	-				-0.1
2,465,789	+				-2.5
2,465,790	-				+0.9
2,465,825	-		IAI47_11625	0.16	+0.3
2,465,843	+		IAI47_11625	0.20	-2.3
2,465,843	+		IAI47_11625	0.20	-2.1
2,465,957	-		IAI47_11625	0.49	+0.6
2,466,073	+		IAI47_11625	0.78	-0.7
2,466,117	+		IAI47_11625	0.89	-0.6
2,466,118	-		IAI47_11625	0.89	-2.1
2,466,215	+				-2.3
2,466,227	+				+0.8
2,466,227	+				-1.9
2,466,228	-				+1.5
2,466,238	+				-1.4
2,466,290	+		IAI47_11630	0.14	+0.7
2,466,291	-		IAI47_11630	0.14	+0.3
2,466,293	-		IAI47_11630	0.15	+0.9
2,466,341	+		IAI47_11630	0.28	-2.3
2,466,395	+		IAI47_11630	0.42	-2.3
2,466,432	-		IAI47_11630	0.52	+1.3
2,466,494	+		IAI47_11630	0.69	-1.3
2,466,495	-		IAI47_11630	0.69	+0.1
2,466,497	-		IAI47_11630	0.69	-0.1
2,466,584	+				+0.1
2,466,612	-				-1.2
2,466,675	-				+0.1
2,466,764	+				-2.7
2,466,771	+				-0.2
2,466,774	-				+1.0
2,466,806	-		IAI47_11635	0.14	-0.1
2,466,849	+		IAI47_11635	0.26	-1.4
2,466,882	+		IAI47_11635	0.36	-3.3
2,466,882	+		IAI47_11635	0.36	-0.5
2,466,883	-		IAI47_11635	0.36	-1.5
2,466,919	+		IAI47_11635	0.46	-0.7
2,466,920	-		IAI47_11635	0.46	+1.1
2,466,925	+		IAI47_11635	0.47	-0.1
2,466,946	-		IAI47_11635	0.53	-2.4
2,466,960	+		IAI47_11635	0.57	-2.6
2,466,960	+		IAI47_11635	0.57	-0.7
2,466,985	-		IAI47_11635	0.64	-0.5
2,467,032	+		IAI47_11635	0.77	-0.5
2,467,032	+		IAI47_11635	0.77	-0.3
2,467,119	+				-0.4
2,467,151	+				-1.4
2,467,152	-				+1.0
2,467,184	+				-1.1
2,467,184	+				-0.9
2,467,184	+				-1.1
2,467,184	+				-0.3
2,467,185	-				+1.4
2,467,185	-				-1.2
2,467,185	-				+1.0
2,467,196	+				-1.2
2,467,196	+				+0.7
2,467,196	+				-0.4
2,467,197	-				-0.7
2,467,241	+				-0.8
2,467,241	+				-0.3
2,467,242	-				+0.3
2,467,258	-				+0.3
2,467,261	+				-1.2
2,467,261	+				-1.0
2,467,262	-				-0.2
2,467,262	-				-0.3
2,467,262	-				-0.3
2,467,265	+				+0.2
2,467,322	+		IAI47_11640	0.17	-1.6
2,467,385	+		IAI47_11640	0.32	-2.3
2,467,385	+		IAI47_11640	0.32	-2.2
2,467,386	-		IAI47_11640	0.32	+1.1
2,467,395	+		IAI47_11640	0.35	-1.4
2,467,395	+		IAI47_11640	0.35	+1.6
2,467,396	-		IAI47_11640	0.35	+0.3
2,467,396	-		IAI47_11640	0.35	-0.4
2,467,413	+		IAI47_11640	0.39	-1.6
2,467,469	+		IAI47_11640	0.52	+0.9
2,467,478	+		IAI47_11640	0.55	-1.7
2,467,478	+		IAI47_11640	0.55	-1.0
2,467,479	-		IAI47_11640	0.55	+1.8
2,467,479	-		IAI47_11640	0.55	+0.3
2,467,479	-		IAI47_11640	0.55	-0.3
2,467,479	-		IAI47_11640	0.55	+0.1
2,467,479	-		IAI47_11640	0.55	+0.2
2,467,504	-		IAI47_11640	0.61	+0.9
2,467,517	-		IAI47_11640	0.64	-0.4
2,467,530	+		IAI47_11640	0.67	-1.5
2,467,531	-		IAI47_11640	0.67	+0.6
2,467,549	-		IAI47_11640	0.72	+1.1
2,467,594	-		IAI47_11640	0.83	+0.5
2,467,594	-		IAI47_11640	0.83	+0.6
2,467,612	-		IAI47_11640	0.87	+0.1
2,467,640	+				-0.0
2,467,655	+				-0.0
2,467,673	+				-1.9
2,467,674	-				-0.0
2,467,710	-				+1.6
2,467,721	-				+0.1
2,467,743	+				-0.2
2,467,743	+				-1.8
2,467,744	-				+0.7
2,467,744	-				+0.9
2,467,744	-				+0.4
2,467,744	-				+0.9
2,467,755	+				-1.8
2,467,755	+				-0.7
2,467,755	+				-1.4
2,467,755	+				+0.1
2,467,756	-				+1.8
2,467,756	-				-0.4
2,467,756	-				-0.0
2,467,756	-				-0.9
2,467,833	+		IAI47_11645	0.18	-1.4
2,467,833	+		IAI47_11645	0.18	-0.8
2,467,833	+		IAI47_11645	0.18	+0.8
2,467,833	+		IAI47_11645	0.18	-1.3
2,467,833	+		IAI47_11645	0.18	+0.5
2,467,833	+		IAI47_11645	0.18	-1.5
2,467,833	+		IAI47_11645	0.18	-0.3
2,467,833	+		IAI47_11645	0.18	-1.0
2,467,834	-		IAI47_11645	0.18	+0.5
2,467,834	-		IAI47_11645	0.18	+1.1
2,467,834	-		IAI47_11645	0.18	+0.3
2,467,834	-		IAI47_11645	0.18	+0.7
2,467,834	-		IAI47_11645	0.18	+1.5
2,467,838	+		IAI47_11645	0.18	-0.7
2,467,865	+		IAI47_11645	0.21	-1.3
2,467,870	+		IAI47_11645	0.21	-0.3
2,467,871	-		IAI47_11645	0.22	+0.3
2,467,890	-		IAI47_11645	0.23	+2.3
2,467,890	-		IAI47_11645	0.23	+1.3
2,467,890	-		IAI47_11645	0.23	+0.2
2,467,917	-		IAI47_11645	0.26	-0.6
2,467,937	+		IAI47_11645	0.28	-1.4
2,467,944	-		IAI47_11645	0.29	+0.3
2,467,947	+		IAI47_11645	0.29	-1.9
2,467,947	+		IAI47_11645	0.29	-0.6
2,467,947	+		IAI47_11645	0.29	-1.4
2,467,947	+		IAI47_11645	0.29	+0.5
2,467,948	-		IAI47_11645	0.29	+0.2
2,467,955	+		IAI47_11645	0.30	-1.0
2,467,955	+		IAI47_11645	0.30	-2.0
2,467,955	+		IAI47_11645	0.30	-0.8
2,467,955	+		IAI47_11645	0.30	-2.4
2,467,956	-		IAI47_11645	0.30	-0.1
2,467,956	-		IAI47_11645	0.30	-0.9
2,468,008	+		IAI47_11645	0.36	-2.5
2,468,009	-		IAI47_11645	0.36	-0.0
2,468,012	+		IAI47_11645	0.36	-1.9
2,468,012	+		IAI47_11645	0.36	-1.4
2,468,012	+		IAI47_11645	0.36	-1.8
2,468,012	+		IAI47_11645	0.36	-2.3
2,468,012	+		IAI47_11645	0.36	-1.9
2,468,012	+		IAI47_11645	0.36	-0.3
2,468,012	+		IAI47_11645	0.36	+0.1
2,468,013	-		IAI47_11645	0.36	+1.2
2,468,013	-		IAI47_11645	0.36	+0.5
2,468,013	-		IAI47_11645	0.36	-0.3
2,468,013	-		IAI47_11645	0.36	+1.9
2,468,013	-		IAI47_11645	0.36	+1.4
2,468,013	-		IAI47_11645	0.36	+0.6
2,468,013	-		IAI47_11645	0.36	+0.6
2,468,013	-		IAI47_11645	0.36	-1.6
2,468,013	-		IAI47_11645	0.36	-0.9
2,468,016	+		IAI47_11645	0.36	-0.7
2,468,016	+		IAI47_11645	0.36	-0.9
2,468,016	+		IAI47_11645	0.36	-1.9
2,468,017	-		IAI47_11645	0.37	+0.7
2,468,017	-		IAI47_11645	0.37	+0.8
2,468,025	+		IAI47_11645	0.37	+0.7
2,468,033	+		IAI47_11645	0.38	-0.4
2,468,033	+		IAI47_11645	0.38	-0.6
2,468,033	+		IAI47_11645	0.38	-0.3
2,468,033	+		IAI47_11645	0.38	-1.5
2,468,033	+		IAI47_11645	0.38	+0.7
2,468,033	+		IAI47_11645	0.38	-0.4
2,468,034	-		IAI47_11645	0.38	-1.0
2,468,034	-		IAI47_11645	0.38	-1.6
2,468,034	-		IAI47_11645	0.38	+0.3
2,468,034	-		IAI47_11645	0.38	-1.5
2,468,034	-		IAI47_11645	0.38	-0.9
2,468,034	-		IAI47_11645	0.38	-0.1
2,468,034	-		IAI47_11645	0.38	+1.3
2,468,034	-		IAI47_11645	0.38	+1.3
2,468,071	+		IAI47_11645	0.42	+2.2
2,468,072	-		IAI47_11645	0.42	+1.6
2,468,091	-		IAI47_11645	0.44	-0.4
2,468,103	-		IAI47_11645	0.45	+0.7
2,468,103	-		IAI47_11645	0.45	-1.0
2,468,103	-		IAI47_11645	0.45	+0.3
2,468,112	+		IAI47_11645	0.46	+0.2
2,468,113	-		IAI47_11645	0.46	-1.8