Strain Fitness in Pantoea sp. MT58 around IAI47_11415

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
2,413,464	+				+1.0
2,413,477	+		IAI47_11410	0.11	-0.8
2,413,477	+		IAI47_11410	0.11	-0.7
2,413,477	+		IAI47_11410	0.11	-1.1
2,413,478	-		IAI47_11410	0.11	-0.3
2,413,478	-		IAI47_11410	0.11	+0.7
2,413,503	+		IAI47_11410	0.13	+0.9
2,413,503	+		IAI47_11410	0.13	-2.2
2,413,504	-		IAI47_11410	0.13	-1.6
2,413,505	+		IAI47_11410	0.13	+0.6
2,413,505	+		IAI47_11410	0.13	+1.7
2,413,506	-		IAI47_11410	0.13	+0.3
2,413,506	-		IAI47_11410	0.13	-0.8
2,413,506	-		IAI47_11410	0.13	+1.8
2,413,506	-		IAI47_11410	0.13	+1.6
2,413,507	+		IAI47_11410	0.14	-2.3
2,413,507	+		IAI47_11410	0.14	-2.2
2,413,507	+		IAI47_11410	0.14	+0.2
2,413,507	+		IAI47_11410	0.14	+1.3
2,413,508	-		IAI47_11410	0.14	-0.2
2,413,508	-		IAI47_11410	0.14	-0.4
2,413,508	-		IAI47_11410	0.14	-1.5
2,413,508	-		IAI47_11410	0.14	-0.3
2,413,508	-		IAI47_11410	0.14	-0.3
2,413,508	-		IAI47_11410	0.14	-0.3
2,413,517	-		IAI47_11410	0.14	-0.7
2,413,517	-		IAI47_11410	0.14	+0.4
2,413,560	-		IAI47_11410	0.19	+0.8
2,413,592	+		IAI47_11410	0.22	+0.8
2,413,592	+		IAI47_11410	0.22	+0.3
2,413,593	-		IAI47_11410	0.22	+1.7
2,413,594	-		IAI47_11410	0.22	+0.0
2,413,598	+		IAI47_11410	0.23	-0.3
2,413,698	+		IAI47_11410	0.32	-0.9
2,413,712	-		IAI47_11410	0.34	-0.7
2,413,725	-		IAI47_11410	0.35	+1.9
2,413,735	+		IAI47_11410	0.36	-0.1
2,413,735	+		IAI47_11410	0.36	-0.7
2,413,736	-		IAI47_11410	0.36	+1.4
2,413,749	+		IAI47_11410	0.38	-1.5
2,413,749	+		IAI47_11410	0.38	-1.8
2,413,749	+		IAI47_11410	0.38	-1.4
2,413,749	+		IAI47_11410	0.38	-0.2
2,413,749	+		IAI47_11410	0.38	-0.7
2,413,749	+		IAI47_11410	0.38	-1.6
2,413,749	+		IAI47_11410	0.38	+0.8
2,413,750	-		IAI47_11410	0.38	+0.7
2,413,750	-		IAI47_11410	0.38	+0.5
2,413,750	-		IAI47_11410	0.38	-1.4
2,413,750	-		IAI47_11410	0.38	+1.8
2,413,750	-		IAI47_11410	0.38	+1.7
2,413,750	-		IAI47_11410	0.38	-1.2
2,413,750	-		IAI47_11410	0.38	-1.4
2,413,751	+		IAI47_11410	0.38	-1.2
2,413,752	-		IAI47_11410	0.38	+1.3
2,413,752	-		IAI47_11410	0.38	-0.7
2,413,752	-		IAI47_11410	0.38	+0.3
2,413,752	-		IAI47_11410	0.38	-0.4
2,413,752	-		IAI47_11410	0.38	-0.8
2,413,810	-		IAI47_11410	0.44	-0.3
2,413,872	-		IAI47_11410	0.50	+0.7
2,413,872	-		IAI47_11410	0.50	+0.7
2,413,896	-		IAI47_11410	0.52	+0.5
2,413,905	-		IAI47_11410	0.53	+2.0
2,413,910	-		IAI47_11410	0.54	-0.2
2,413,934	-		IAI47_11410	0.56	-1.1
2,413,962	+		IAI47_11410	0.59	-0.5
2,413,963	-		IAI47_11410	0.59	-2.4
2,413,963	-		IAI47_11410	0.59	+1.3
2,413,970	-		IAI47_11410	0.59	-1.7
2,413,970	-		IAI47_11410	0.59	-1.8
2,414,014	+		IAI47_11410	0.64	-0.8
2,414,014	+		IAI47_11410	0.64	-0.5
2,414,015	-		IAI47_11410	0.64	-1.5
2,414,061	+		IAI47_11410	0.69	-0.9
2,414,061	+		IAI47_11410	0.69	-2.2
2,414,061	+		IAI47_11410	0.69	-1.5
2,414,061	+		IAI47_11410	0.69	+3.1
2,414,061	+		IAI47_11410	0.69	-0.1
2,414,061	+		IAI47_11410	0.69	-1.5
2,414,061	+		IAI47_11410	0.69	-0.8
2,414,061	+		IAI47_11410	0.69	-1.8
2,414,062	-		IAI47_11410	0.69	+0.9
2,414,062	-		IAI47_11410	0.69	-1.3
2,414,062	-		IAI47_11410	0.69	-0.9
2,414,062	-		IAI47_11410	0.69	-0.3
2,414,062	-		IAI47_11410	0.69	-0.1
2,414,062	-		IAI47_11410	0.69	-0.6
2,414,062	-		IAI47_11410	0.69	+0.2
2,414,062	-		IAI47_11410	0.69	-0.2
2,414,063	-		IAI47_11410	0.69	-0.3
2,414,094	-		IAI47_11410	0.72	+0.0
2,414,145	-		IAI47_11410	0.77	-1.8
2,414,188	+		IAI47_11410	0.81	-0.4
2,414,209	+		IAI47_11410	0.83	-1.4
2,414,209	+		IAI47_11410	0.83	+0.9
2,414,209	+		IAI47_11410	0.83	+0.7
2,414,210	-		IAI47_11410	0.83	-0.3
2,414,210	-		IAI47_11410	0.83	-0.1
2,414,210	-		IAI47_11410	0.83	+0.2
2,414,230	-		IAI47_11410	0.85	+0.6
2,414,233	+		IAI47_11410	0.86	+0.3
2,414,244	-		IAI47_11410	0.87	-0.2
2,414,251	-		IAI47_11410	0.87	-0.6
2,414,302	+				-1.1
2,414,347	+				-1.7
2,414,348	-				-1.5
2,414,348	-				+3.1
2,414,348	-				-0.5
2,414,348	-				-0.1
2,414,348	-				-2.6
2,414,348	-				-0.8
2,414,348	-				-0.5
2,414,348	-				-0.5
2,414,350	-				-0.4
2,414,350	-				-0.5
2,414,402	-				-0.8
2,414,412	+				+0.3
2,414,412	+				-1.1
2,414,412	+				-0.2
2,414,414	+				-1.0
2,414,415	-				-0.3
2,414,451	-				-0.6
2,414,552	+		IAI47_11415	0.22	-2.1
2,414,570	-		IAI47_11415	0.26	-0.5
2,414,662	-		IAI47_11415	0.46	-0.3
2,414,677	-		IAI47_11415	0.49	+1.3
2,414,894	+				-0.7
2,414,913	-				+0.4
2,415,032	+		IAI47_11420	0.71	+0.5
2,415,033	-		IAI47_11420	0.72	-0.6
2,415,111	+				-2.5
2,415,113	+				+0.3
2,415,162	+		IAI47_11425	0.12	-0.8
2,415,225	-		IAI47_11425	0.23	+2.3
2,415,259	-		IAI47_11425	0.28	-0.9
2,415,282	+		IAI47_11425	0.32	-2.1
2,415,283	-		IAI47_11425	0.32	-0.1
2,415,288	-		IAI47_11425	0.33	-0.5
2,415,375	-		IAI47_11425	0.48	-0.3
2,415,386	+		IAI47_11425	0.50	-1.5
2,415,387	-		IAI47_11425	0.50	+1.3
2,415,496	+		IAI47_11425	0.68	-0.4
2,415,554	-		IAI47_11425	0.78	-1.5
2,415,568	+		IAI47_11425	0.80	+0.0
2,415,582	-		IAI47_11425	0.83	+0.0
2,415,679	-				-1.1
2,415,685	+				-0.1
2,415,686	-				-1.9
2,415,690	-				+0.7
2,415,722	+				+0.5
2,415,722	+				+0.1
2,415,722	+				+0.2
2,415,722	+				+0.2
2,415,723	-				+0.6
2,415,723	-				-1.3
2,415,725	-				-0.3
2,415,800	-				+0.1
2,415,810	+				-0.8
2,415,886	+				-0.3
2,415,887	-				+0.2
2,415,887	-				+0.0
2,415,898	+				+1.3
2,415,898	+				-0.1
2,415,898	+				+0.9
2,415,899	-				+0.3
2,415,901	+				-0.1
2,415,901	+				-1.8
2,415,901	+				+0.1
2,415,901	+				+1.0
2,415,901	+				-1.0
2,415,901	+				-0.8
2,415,902	-				+0.2
2,415,902	-				+0.0
2,415,902	-				-1.6
2,415,902	-				+0.3
2,415,902	-				-0.8