Strain Fitness in Pantoea sp. MT58 around IAI47_08145

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
1,716,427	+		IAI47_08140	0.56	+0.3
1,716,428	-		IAI47_08140	0.56	+0.9
1,716,447	+		IAI47_08140	0.58	+1.6
1,716,495	+		IAI47_08140	0.61	+1.2
1,716,540	+		IAI47_08140	0.64	+0.2
1,716,540	+		IAI47_08140	0.64	-0.1
1,716,541	-		IAI47_08140	0.64	+1.5
1,716,543	+		IAI47_08140	0.64	+0.3
1,716,543	+		IAI47_08140	0.64	+1.6
1,716,544	-		IAI47_08140	0.64	-0.2
1,716,544	-		IAI47_08140	0.64	+1.7
1,716,544	-		IAI47_08140	0.64	+1.0
1,716,544	-		IAI47_08140	0.64	+2.5
1,716,553	-		IAI47_08140	0.65	+1.1
1,716,576	+		IAI47_08140	0.67	+1.6
1,716,577	-		IAI47_08140	0.67	+2.7
1,716,577	-		IAI47_08140	0.67	+1.3
1,716,646	+		IAI47_08140	0.72	+1.1
1,716,646	+		IAI47_08140	0.72	+0.1
1,716,647	-		IAI47_08140	0.72	-0.8
1,716,651	+		IAI47_08140	0.72	+1.3
1,716,652	-		IAI47_08140	0.72	+0.0
1,716,660	+		IAI47_08140	0.73	-0.4
1,716,661	-		IAI47_08140	0.73	+2.2
1,716,757	-		IAI47_08140	0.79	+0.9
1,716,757	-		IAI47_08140	0.79	-1.5
1,716,764	+		IAI47_08140	0.80	-0.3
1,716,764	+		IAI47_08140	0.80	+1.5
1,716,768	+		IAI47_08140	0.80	+0.4
1,716,801	+		IAI47_08140	0.83	-0.4
1,716,802	-		IAI47_08140	0.83	+1.5
1,716,802	-		IAI47_08140	0.83	+0.9
1,716,802	-		IAI47_08140	0.83	+2.0
1,716,802	-		IAI47_08140	0.83	+1.3
1,716,908	+				+0.9
1,716,909	-				+1.1
1,716,909	-				+0.8
1,716,929	+				+1.9
1,716,930	-				+1.3
1,716,930	-				+2.9
1,716,930	-				+0.5
1,716,982	+				+1.3
1,716,982	+				+0.5
1,716,982	+				+0.4
1,716,983	-				-1.2
1,716,983	-				+0.5
1,716,983	-				+0.6
1,716,983	-				+1.6
1,716,983	-				-0.9
1,716,983	-				+0.0
1,717,000	-				+1.4
1,717,038	+				-0.5
1,717,039	-				-1.2
1,717,039	-				-0.7
1,717,051	-				-0.2
1,717,051	-				+0.8
1,717,051	-				+1.1
1,717,051	-				+1.3
1,717,059	+				+1.1
1,717,059	+				+1.3
1,717,060	-				+0.5
1,717,060	-				+0.4
1,717,060	-				-0.7
1,717,060	-				-0.4
1,717,060	-				-0.3
1,717,061	+				+1.0
1,717,061	+				+1.4
1,717,062	-				-0.8
1,717,062	-				+0.7
1,717,062	-				+0.6
1,717,062	-				+0.8
1,717,062	-				-0.2
1,717,062	-				+0.9
1,717,083	+				+0.6
1,717,084	-				-0.7
1,717,084	-				+0.0
1,717,092	+				+0.2
1,717,105	+				-0.0
1,717,106	-				-0.2
1,717,116	+				+0.8
1,717,117	-				-0.6
1,717,123	-				+1.1
1,717,131	+				+1.3
1,717,132	-				+0.4
1,717,136	+				-1.1
1,717,136	+				-0.1
1,717,136	+				+1.6
1,717,136	+				-0.2
1,717,136	+				+0.5
1,717,137	-				-1.4
1,717,137	-				-0.7
1,717,137	-				-0.5
1,717,144	+				-0.3
1,717,144	+				+0.5
1,717,144	+				+1.0
1,717,145	-				-0.5
1,717,145	-				+0.1
1,717,148	+				+0.3
1,717,148	+				-1.1
1,717,148	+				+1.5
1,717,148	+				+0.4
1,717,148	+				+1.9
1,717,149	-				+1.3
1,717,149	-				-0.4
1,717,149	-				-0.5
1,717,149	-				+1.2
1,717,149	-				-0.5
1,717,155	+				+0.5
1,717,155	+				+1.2
1,717,156	-				+1.1
1,717,156	-				-0.4
1,717,156	-				-0.2
1,717,157	+				+0.0
1,717,157	+				-1.0
1,717,158	-				-0.9
1,717,158	-				-0.5
1,717,158	-				-0.6
1,717,158	-				-0.5
1,717,158	-				+1.3
1,717,158	-				-0.7
1,717,158	-				-0.4
1,717,158	-				+0.9
1,717,167	+				-0.9
1,717,168	-				-2.6
1,717,168	-				+0.3
1,717,168	-				-0.5
1,717,168	-				+0.5
1,717,188	-				+0.1
1,717,195	+				-1.4
1,717,195	+				+0.8
1,717,195	+				+1.0
1,717,195	+				+0.6
1,717,195	+				-0.6
1,717,195	+				+1.0
1,717,196	-				+2.1
1,717,196	-				-1.1
1,717,196	-				-0.9
1,717,196	-				-0.2
1,717,225	+				+0.7
1,717,225	+				+0.5
1,717,230	+				-2.3
1,717,230	+				-0.2
1,717,267	+				-0.2
1,717,267	+				+2.3
1,717,268	-				+1.9
1,717,282	-				-0.7
1,717,282	-				-1.5
1,717,305	+				+0.6
1,717,305	+				+0.4
1,717,305	+				+1.4
1,717,305	+				+2.2
1,717,306	-				-0.0
1,717,306	-				-0.3
1,717,368	+				-0.1
1,717,369	-				-0.0
1,717,369	-				+0.8
1,717,399	+				+2.2
1,717,399	+				-0.0
1,717,399	+				+1.1
1,717,399	+				+1.5
1,717,400	-				+0.0
1,717,403	-				-0.2
1,717,403	-				-0.7
1,717,435	+				+1.3
1,717,436	-				-0.7
1,717,436	-				-0.4
1,717,436	-				+1.1
1,717,496	-				-1.8
1,717,498	+				+1.3
1,717,597	+		IAI47_08145	0.12	+1.5
1,717,597	+		IAI47_08145	0.12	+1.9
1,717,597	+		IAI47_08145	0.12	+1.5
1,717,598	-		IAI47_08145	0.12	+0.4
1,717,598	-		IAI47_08145	0.12	-1.3
1,717,598	-		IAI47_08145	0.12	+0.6
1,717,674	+		IAI47_08145	0.17	+0.9
1,717,674	+		IAI47_08145	0.17	+1.4
1,717,674	+		IAI47_08145	0.17	+2.0
1,717,675	-		IAI47_08145	0.17	+2.8
1,717,853	+		IAI47_08145	0.27	+2.3
1,717,908	+		IAI47_08145	0.30	+0.0
1,717,908	+		IAI47_08145	0.30	-0.8
1,717,908	+		IAI47_08145	0.30	+0.8
1,717,909	-		IAI47_08145	0.30	+0.8
1,717,909	-		IAI47_08145	0.30	+0.3
1,717,930	+		IAI47_08145	0.32	-0.5
1,717,931	-		IAI47_08145	0.32	+0.9
1,717,931	-		IAI47_08145	0.32	+3.3
1,717,931	-		IAI47_08145	0.32	+0.6
1,717,951	+		IAI47_08145	0.33	+1.9
1,717,952	-		IAI47_08145	0.33	-0.9
1,717,952	-		IAI47_08145	0.33	+1.0
1,717,952	-		IAI47_08145	0.33	+0.9
1,717,956	+		IAI47_08145	0.33	+0.3
1,717,956	+		IAI47_08145	0.33	+2.3
1,717,957	-		IAI47_08145	0.33	-0.4
1,717,957	-		IAI47_08145	0.33	+0.1
1,717,957	-		IAI47_08145	0.33	+1.3
1,717,985	-		IAI47_08145	0.35	+0.9
1,717,985	-		IAI47_08145	0.35	-0.1
1,718,008	+		IAI47_08145	0.36	+0.5
1,718,008	+		IAI47_08145	0.36	+1.7
1,718,008	+		IAI47_08145	0.36	+0.6
1,718,008	+		IAI47_08145	0.36	-0.2
1,718,008	+		IAI47_08145	0.36	+1.3
1,718,009	-		IAI47_08145	0.36	+0.1
1,718,009	-		IAI47_08145	0.36	+0.2
1,718,009	-		IAI47_08145	0.36	+0.5
1,718,009	-		IAI47_08145	0.36	+0.5
1,718,009	-		IAI47_08145	0.36	+0.9
1,718,009	-		IAI47_08145	0.36	+0.3
1,718,012	+		IAI47_08145	0.36	+0.9
1,718,012	+		IAI47_08145	0.36	+2.5
1,718,012	+		IAI47_08145	0.36	+2.7
1,718,012	+		IAI47_08145	0.36	+0.8
1,718,012	+		IAI47_08145	0.36	+1.7
1,718,012	+		IAI47_08145	0.36	+1.3
1,718,012	+		IAI47_08145	0.36	+1.8
1,718,012	+		IAI47_08145	0.36	+1.6
1,718,013	-		IAI47_08145	0.36	+1.5
1,718,013	-		IAI47_08145	0.36	+0.7
1,718,013	-		IAI47_08145	0.36	-0.1
1,718,013	-		IAI47_08145	0.36	+0.0
1,718,013	-		IAI47_08145	0.36	+1.3
1,718,013	-		IAI47_08145	0.36	-0.4
1,718,013	-		IAI47_08145	0.36	+2.7
1,718,013	-		IAI47_08145	0.36	+1.8
1,718,013	-		IAI47_08145	0.36	+1.9
1,718,013	-		IAI47_08145	0.36	+1.1
1,718,014	+		IAI47_08145	0.37	+2.3
1,718,019	+		IAI47_08145	0.37	+1.8
1,718,019	+		IAI47_08145	0.37	+0.9
1,718,019	+		IAI47_08145	0.37	+0.1
1,718,019	+		IAI47_08145	0.37	+2.3
1,718,019	+		IAI47_08145	0.37	+2.1
1,718,020	-		IAI47_08145	0.37	+1.0
1,718,020	-		IAI47_08145	0.37	+0.5
1,718,020	-		IAI47_08145	0.37	-0.4
1,718,020	-		IAI47_08145	0.37	+0.0
1,718,020	-		IAI47_08145	0.37	+1.0
1,718,020	-		IAI47_08145	0.37	+2.3
1,718,020	-		IAI47_08145	0.37	+0.3
1,718,020	-		IAI47_08145	0.37	+1.6
1,718,020	-		IAI47_08145	0.37	+1.7
1,718,020	-		IAI47_08145	0.37	-0.2
1,718,055	+		IAI47_08145	0.39	+1.3
1,718,056	-		IAI47_08145	0.39	+1.3
1,718,056	-		IAI47_08145	0.39	+0.9
1,718,077	+		IAI47_08145	0.40	+1.3
1,718,077	+		IAI47_08145	0.40	+0.8
1,718,077	+		IAI47_08145	0.40	+1.0
1,718,077	+		IAI47_08145	0.40	+0.6
1,718,078	-		IAI47_08145	0.40	-1.6
1,718,078	-		IAI47_08145	0.40	+2.1
1,718,078	-		IAI47_08145	0.40	+2.3
1,718,078	-		IAI47_08145	0.40	+1.5
1,718,080	+		IAI47_08145	0.40	+1.9
1,718,081	-		IAI47_08145	0.40	+1.9
1,718,081	-		IAI47_08145	0.40	-0.3
1,718,081	-		IAI47_08145	0.40	+0.9
1,718,098	+		IAI47_08145	0.41	+0.5
1,718,098	+		IAI47_08145	0.41	+1.5
1,718,132	+		IAI47_08145	0.43	-0.7
1,718,133	-		IAI47_08145	0.43	-0.4
1,718,133	-		IAI47_08145	0.43	+1.1
1,718,133	-		IAI47_08145	0.43	-0.5
1,718,134	+		IAI47_08145	0.43	+0.7
1,718,134	+		IAI47_08145	0.43	+1.7
1,718,134	+		IAI47_08145	0.43	+2.8
1,718,134	+		IAI47_08145	0.43	+0.8
1,718,135	-		IAI47_08145	0.44	+0.3
1,718,135	-		IAI47_08145	0.44	+1.3
1,718,135	-		IAI47_08145	0.44	+0.6
1,718,135	-		IAI47_08145	0.44	+1.6
1,718,135	-		IAI47_08145	0.44	+1.3
1,718,138	+		IAI47_08145	0.44	+1.7
1,718,138	+		IAI47_08145	0.44	+0.5
1,718,139	-		IAI47_08145	0.44	-0.1
1,718,185	+		IAI47_08145	0.46	+1.4
1,718,185	+		IAI47_08145	0.46	+1.4
1,718,186	-		IAI47_08145	0.47	+0.0
1,718,189	-		IAI47_08145	0.47	+0.2
1,718,203	+		IAI47_08145	0.48	+0.3
1,718,209	+		IAI47_08145	0.48	+0.8
1,718,272	+		IAI47_08145	0.52	+1.9
1,718,272	+		IAI47_08145	0.52	+1.6
1,718,273	-		IAI47_08145	0.52	-0.0
1,718,273	-		IAI47_08145	0.52	+0.8
1,718,275	+		IAI47_08145	0.52	+1.9
1,718,276	-		IAI47_08145	0.52	+0.8
1,718,276	-		IAI47_08145	0.52	+1.2
1,718,284	+		IAI47_08145	0.52	-1.6
1,718,305	-		IAI47_08145	0.53	+0.6
1,718,329	+		IAI47_08145	0.55	+1.5
1,718,329	+		IAI47_08145	0.55	+0.1
1,718,330	-		IAI47_08145	0.55	+0.7
1,718,356	+		IAI47_08145	0.56	+1.0
1,718,357	-		IAI47_08145	0.56	+0.8
1,718,359	+		IAI47_08145	0.57	+0.9
1,718,359	+		IAI47_08145	0.57	+1.3
1,718,418	+		IAI47_08145	0.60	-0.3
1,718,418	+		IAI47_08145	0.60	+1.2
1,718,418	+		IAI47_08145	0.60	+0.5
1,718,458	+		IAI47_08145	0.62	+2.7
1,718,458	+		IAI47_08145	0.62	+1.1
1,718,458	+		IAI47_08145	0.62	+2.9
1,718,467	+		IAI47_08145	0.63	+1.9
1,718,468	-		IAI47_08145	0.63	+1.0
1,718,470	+		IAI47_08145	0.63	+0.9
1,718,470	+		IAI47_08145	0.63	+1.1
1,718,470	+		IAI47_08145	0.63	+1.8
1,718,470	+		IAI47_08145	0.63	+1.3
1,718,471	-		IAI47_08145	0.63	+1.6
1,718,471	-		IAI47_08145	0.63	+1.3
1,718,473	+		IAI47_08145	0.63	+1.8
1,718,473	+		IAI47_08145	0.63	+2.8
1,718,473	+		IAI47_08145	0.63	+1.0
1,718,473	+		IAI47_08145	0.63	+2.6
1,718,474	-		IAI47_08145	0.63	+0.2
1,718,474	-		IAI47_08145	0.63	+0.8
1,718,474	-		IAI47_08145	0.63	+1.3
1,718,474	-		IAI47_08145	0.63	+0.6
1,718,488	-		IAI47_08145	0.64	+1.0
1,718,533	+		IAI47_08145	0.67	+1.4
1,718,543	-		IAI47_08145	0.67	+1.8
1,718,560	+		IAI47_08145	0.68	+1.2
1,718,561	-		IAI47_08145	0.68	-0.5
1,718,561	-		IAI47_08145	0.68	+1.9
1,718,590	+		IAI47_08145	0.70	-0.2
1,718,591	-		IAI47_08145	0.70	-0.8
1,718,596	+		IAI47_08145	0.70	+1.9
1,718,597	-		IAI47_08145	0.70	+1.0
1,718,597	-		IAI47_08145	0.70	-1.0
1,718,602	+		IAI47_08145	0.71	-0.1
1,718,602	+		IAI47_08145	0.71	+0.7
1,718,603	-		IAI47_08145	0.71	-1.0
1,718,603	-		IAI47_08145	0.71	+0.0
1,718,617	+		IAI47_08145	0.72	+1.8
1,718,617	+		IAI47_08145	0.72	+0.8
1,718,618	-		IAI47_08145	0.72	+0.8
1,718,618	-		IAI47_08145	0.72	+0.8
1,718,618	-		IAI47_08145	0.72	+1.0
1,718,618	-		IAI47_08145	0.72	-0.5
1,718,618	-		IAI47_08145	0.72	+0.8
1,718,618	-		IAI47_08145	0.72	+0.3
1,718,643	+		IAI47_08145	0.73	+3.0
1,718,643	+		IAI47_08145	0.73	+1.3
1,718,644	-		IAI47_08145	0.73	+0.7
1,718,659	+		IAI47_08145	0.74	+1.7
1,718,659	+		IAI47_08145	0.74	+0.6
1,718,660	-		IAI47_08145	0.74	-0.5
1,718,700	+		IAI47_08145	0.76	+1.4
1,718,710	+		IAI47_08145	0.77	-0.2
1,718,710	+		IAI47_08145	0.77	+0.3
1,718,710	+		IAI47_08145	0.77	+0.2
1,718,711	-		IAI47_08145	0.77	+0.7
1,718,713	+		IAI47_08145	0.77	+2.8
1,718,714	-		IAI47_08145	0.77	+0.6
1,718,765	-		IAI47_08145	0.80	+1.4
1,718,765	-		IAI47_08145	0.80	+0.2
1,718,765	-		IAI47_08145	0.80	+1.0
1,718,775	-		IAI47_08145	0.81	+0.9
1,718,775	-		IAI47_08145	0.81	+0.3
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