Strain Fitness in Pantoea sp. MT58 around IAI47_07350

Experiment: Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
1,552,942	-		IAI47_07345	0.22	+0.7
1,552,959	+		IAI47_07345	0.24	+0.4
1,552,959	+		IAI47_07345	0.24	-2.4
1,552,960	-		IAI47_07345	0.24	+0.4
1,552,965	+		IAI47_07345	0.25	-0.0
1,552,965	+		IAI47_07345	0.25	-0.8
1,552,965	+		IAI47_07345	0.25	-0.0
1,552,965	+		IAI47_07345	0.25	+1.0
1,552,965	+		IAI47_07345	0.25	-0.1
1,552,966	-		IAI47_07345	0.25	-1.3
1,552,966	-		IAI47_07345	0.25	+1.0
1,552,966	-		IAI47_07345	0.25	-1.1
1,553,037	+		IAI47_07345	0.33	-0.1
1,553,037	+		IAI47_07345	0.33	-0.6
1,553,037	+		IAI47_07345	0.33	-1.1
1,553,038	-		IAI47_07345	0.33	+1.3
1,553,038	-		IAI47_07345	0.33	-0.6
1,553,038	-		IAI47_07345	0.33	-0.6
1,553,038	-		IAI47_07345	0.33	-0.2
1,553,048	-		IAI47_07345	0.34	-0.8
1,553,056	-		IAI47_07345	0.35	-0.1
1,553,056	-		IAI47_07345	0.35	+0.1
1,553,062	+		IAI47_07345	0.36	-1.1
1,553,141	-		IAI47_07345	0.45	-0.6
1,553,157	+		IAI47_07345	0.47	+0.2
1,553,161	+		IAI47_07345	0.47	+2.3
1,553,161	+		IAI47_07345	0.47	-0.9
1,553,162	-		IAI47_07345	0.47	-1.6
1,553,162	-		IAI47_07345	0.47	-1.0
1,553,162	-		IAI47_07345	0.47	-0.8
1,553,173	+		IAI47_07345	0.49	-0.5
1,553,185	-		IAI47_07345	0.50	-1.4
1,553,211	-		IAI47_07345	0.53	-0.0
1,553,219	+		IAI47_07345	0.54	-1.1
1,553,219	+		IAI47_07345	0.54	-1.9
1,553,220	-		IAI47_07345	0.54	-1.5
1,553,220	-		IAI47_07345	0.54	-0.9
1,553,220	-		IAI47_07345	0.54	+0.3
1,553,222	+		IAI47_07345	0.54	+1.2
1,553,222	+		IAI47_07345	0.54	-0.2
1,553,222	+		IAI47_07345	0.54	-1.0
1,553,222	+		IAI47_07345	0.54	+0.3
1,553,222	+		IAI47_07345	0.54	-1.6
1,553,222	+		IAI47_07345	0.54	+1.0
1,553,222	+		IAI47_07345	0.54	-0.0
1,553,222	+		IAI47_07345	0.54	-0.4
1,553,222	+		IAI47_07345	0.54	-0.1
1,553,222	+		IAI47_07345	0.54	+0.2
1,553,222	+		IAI47_07345	0.54	-0.5
1,553,222	+		IAI47_07345	0.54	+0.1
1,553,222	+		IAI47_07345	0.54	-1.9
1,553,222	+		IAI47_07345	0.54	+0.3
1,553,222	+		IAI47_07345	0.54	+1.5
1,553,222	+		IAI47_07345	0.54	-0.1
1,553,222	+		IAI47_07345	0.54	-1.9
1,553,222	+		IAI47_07345	0.54	-1.1
1,553,222	+		IAI47_07345	0.54	+1.5
1,553,222	+		IAI47_07345	0.54	+0.5
1,553,223	-		IAI47_07345	0.54	+1.3
1,553,223	-		IAI47_07345	0.54	-0.7
1,553,223	-		IAI47_07345	0.54	+0.2
1,553,223	-		IAI47_07345	0.54	+1.3
1,553,223	-		IAI47_07345	0.54	-2.1
1,553,223	-		IAI47_07345	0.54	+1.3
1,553,223	-		IAI47_07345	0.54	+0.8
1,553,223	-		IAI47_07345	0.54	-0.4
1,553,223	-		IAI47_07345	0.54	+0.1
1,553,223	-		IAI47_07345	0.54	-0.9
1,553,223	-		IAI47_07345	0.54	-0.9
1,553,223	-		IAI47_07345	0.54	-1.7
1,553,223	-		IAI47_07345	0.54	+0.4
1,553,223	-		IAI47_07345	0.54	-0.3
1,553,244	+		IAI47_07345	0.57	+0.9
1,553,255	+		IAI47_07345	0.58	-1.4
1,553,255	+		IAI47_07345	0.58	+0.2
1,553,256	-		IAI47_07345	0.58	+0.7
1,553,256	-		IAI47_07345	0.58	-0.0
1,553,284	+		IAI47_07345	0.61	+1.0
1,553,284	+		IAI47_07345	0.61	+0.7
1,553,285	-		IAI47_07345	0.61	-0.6
1,553,285	-		IAI47_07345	0.61	-1.2
1,553,288	-		IAI47_07345	0.62	-0.9
1,553,299	+		IAI47_07345	0.63	+0.8
1,553,318	-		IAI47_07345	0.65	-0.3
1,553,343	+		IAI47_07345	0.68	-1.4
1,553,343	+		IAI47_07345	0.68	-0.3
1,553,343	+		IAI47_07345	0.68	+0.7
1,553,344	-		IAI47_07345	0.68	-0.2
1,553,346	+		IAI47_07345	0.68	+0.3
1,553,347	-		IAI47_07345	0.68	-0.1
1,553,419	+		IAI47_07345	0.76	+0.9
1,553,419	+		IAI47_07345	0.76	+1.1
1,553,439	+		IAI47_07345	0.79	-0.4
1,553,440	-		IAI47_07345	0.79	-1.8
1,553,440	-		IAI47_07345	0.79	-0.1
1,553,466	+		IAI47_07345	0.82	+0.5
1,553,466	+		IAI47_07345	0.82	-1.3
1,553,466	+		IAI47_07345	0.82	-2.3
1,553,466	+		IAI47_07345	0.82	+0.5
1,553,466	+		IAI47_07345	0.82	-0.8
1,553,467	-		IAI47_07345	0.82	-1.5
1,553,467	-		IAI47_07345	0.82	-1.1
1,553,467	-		IAI47_07345	0.82	-1.1
1,553,467	-		IAI47_07345	0.82	-1.6
1,553,467	-		IAI47_07345	0.82	-1.3
1,553,493	+		IAI47_07345	0.85	+1.0
1,553,506	+		IAI47_07345	0.86	-1.1
1,553,506	+		IAI47_07345	0.86	+0.7
1,553,506	+		IAI47_07345	0.86	-0.4
1,553,507	-		IAI47_07345	0.86	-0.4
1,553,507	-		IAI47_07345	0.86	-0.7
1,553,507	-		IAI47_07345	0.86	-0.4
1,553,507	-		IAI47_07345	0.86	+2.7
1,553,576	-				+2.6
1,553,709	+				-0.4
1,553,710	-				-1.7
1,553,749	-				-0.1
1,553,749	-				-0.3
1,553,753	-				+0.6
1,553,753	-				+0.9
1,553,778	-				-0.8
1,553,870	-				+1.2
1,553,961	-		IAI47_07350	0.20	-0.9
1,554,209	-				-1.6
1,554,215	-				-1.4
1,554,256	+				-2.1
1,554,384	-				-1.0
1,554,471	-				-1.9
1,554,471	-				+0.4
1,554,472	+				-0.9
1,554,481	+				-1.7
1,554,516	+				+1.2
1,554,517	-				-1.6
1,554,535	-				-1.4
1,554,537	+				-0.5
1,554,575	+				-1.8
1,554,579	-				-1.1
1,554,580	+				-1.3
1,554,581	-				-0.9
1,554,581	-				-0.0
1,554,632	+		IAI47_07355	0.14	+2.0
1,554,632	+		IAI47_07355	0.14	-1.4
1,554,633	-		IAI47_07355	0.14	-2.4
1,554,642	+		IAI47_07355	0.15	-1.9
1,554,729	+		IAI47_07355	0.26	-0.5
1,554,729	+		IAI47_07355	0.26	+0.3
1,554,729	+		IAI47_07355	0.26	-0.1
1,554,729	+		IAI47_07355	0.26	+0.6
1,554,736	-		IAI47_07355	0.27	-1.6
1,554,742	+		IAI47_07355	0.28	-0.0
1,554,742	+		IAI47_07355	0.28	+0.5
1,554,808	-		IAI47_07355	0.36	-0.6
1,554,812	+		IAI47_07355	0.37	-0.2
1,554,852	-		IAI47_07355	0.42	-1.3
1,554,873	+		IAI47_07355	0.44	+0.3
1,554,886	-		IAI47_07355	0.46	-0.6
1,554,886	-		IAI47_07355	0.46	-1.1
1,554,999	+		IAI47_07355	0.60	-0.6
1,555,001	+		IAI47_07355	0.61	-0.1
1,555,002	-		IAI47_07355	0.61	-1.4
1,555,005	+		IAI47_07355	0.61	+0.5
1,555,152	+		IAI47_07355	0.80	-0.1