Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22930 and HSERO_RS22935 are separated by 33 nucleotides HSERO_RS22935 and HSERO_RS22940 are separated by 235 nucleotides
HSERO_RS22930: HSERO_RS22930 - helicase, at 5,261,569 to 5,264,058
_RS22930
HSERO_RS22935: HSERO_RS22935 - metallothio multi-domain protein, at 5,264,092 to 5,264,271
_RS22935
HSERO_RS22940: HSERO_RS22940 - ABC transporter substrate-binding protein, at 5,264,507 to 5,265,478
_RS22940
Position (kb) 5264
5265 Strain fitness (log2 ratio) -1
0
1 at 5263.228 kb on + strand, within HSERO_RS22930 at 5263.241 kb on + strand, within HSERO_RS22930 at 5263.249 kb on - strand, within HSERO_RS22930 at 5263.258 kb on - strand, within HSERO_RS22930 at 5263.399 kb on + strand, within HSERO_RS22930 at 5263.407 kb on - strand, within HSERO_RS22930 at 5263.432 kb on + strand, within HSERO_RS22930 at 5263.567 kb on + strand, within HSERO_RS22930 at 5263.642 kb on - strand, within HSERO_RS22930 at 5263.642 kb on - strand, within HSERO_RS22930 at 5263.829 kb on + strand at 5263.856 kb on + strand at 5263.856 kb on + strand at 5263.856 kb on + strand at 5263.932 kb on + strand at 5263.962 kb on + strand at 5264.179 kb on - strand, within HSERO_RS22935 at 5264.197 kb on + strand, within HSERO_RS22935 at 5264.223 kb on - strand, within HSERO_RS22935 at 5264.572 kb on + strand at 5264.588 kb on + strand at 5264.776 kb on - strand, within HSERO_RS22940 at 5264.987 kb on + strand, within HSERO_RS22940 at 5264.994 kb on + strand, within HSERO_RS22940 at 5265.030 kb on - strand, within HSERO_RS22940 at 5265.149 kb on - strand, within HSERO_RS22940 at 5265.149 kb on - strand, within HSERO_RS22940 at 5265.194 kb on + strand, within HSERO_RS22940 at 5265.240 kb on + strand, within HSERO_RS22940 at 5265.254 kb on + strand, within HSERO_RS22940
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 5,263,228 + HSERO_RS22930 0.67 +0.0 5,263,241 + HSERO_RS22930 0.67 -0.3 5,263,249 - HSERO_RS22930 0.67 -0.4 5,263,258 - HSERO_RS22930 0.68 -1.0 5,263,399 + HSERO_RS22930 0.73 -0.4 5,263,407 - HSERO_RS22930 0.74 -0.7 5,263,432 + HSERO_RS22930 0.75 +0.5 5,263,567 + HSERO_RS22930 0.80 -0.7 5,263,642 - HSERO_RS22930 0.83 -0.1 5,263,642 - HSERO_RS22930 0.83 -0.5 5,263,829 + -0.5 5,263,856 + -0.2 5,263,856 + -0.2 5,263,856 + -0.0 5,263,932 + -0.5 5,263,962 + -0.2 5,264,179 - HSERO_RS22935 0.48 +1.5 5,264,197 + HSERO_RS22935 0.58 +0.3 5,264,223 - HSERO_RS22935 0.73 -0.0 5,264,572 + -0.8 5,264,588 + +0.6 5,264,776 - HSERO_RS22940 0.28 +0.2 5,264,987 + HSERO_RS22940 0.49 +0.2 5,264,994 + HSERO_RS22940 0.50 -0.2 5,265,030 - HSERO_RS22940 0.54 +0.0 5,265,149 - HSERO_RS22940 0.66 +0.3 5,265,149 - HSERO_RS22940 0.66 -0.3 5,265,194 + HSERO_RS22940 0.71 +0.1 5,265,240 + HSERO_RS22940 0.75 -0.1 5,265,254 + HSERO_RS22940 0.77 +1.4
Or see this region's nucleotide sequence