Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22730 and HSERO_RS22735 are separated by 478 nucleotides HSERO_RS22735 and HSERO_RS22740 are separated by 186 nucleotides
HSERO_RS22730: HSERO_RS22730 - sugar ABC transporter substrate-binding protein, at 5,212,892 to 5,214,232
_RS22730
HSERO_RS22735: HSERO_RS22735 - sugar ABC transporter substrate-binding protein, at 5,214,711 to 5,215,973
_RS22735
HSERO_RS22740: HSERO_RS22740 - ABC transporter permease, at 5,216,160 to 5,217,074
_RS22740
Position (kb) 5214
5215
5216 Strain fitness (log2 ratio) -1
0
1
2 at 5213.938 kb on - strand, within HSERO_RS22730 at 5214.054 kb on + strand, within HSERO_RS22730 at 5214.056 kb on + strand, within HSERO_RS22730 at 5214.191 kb on - strand at 5214.235 kb on - strand at 5214.260 kb on + strand at 5214.268 kb on - strand at 5214.303 kb on + strand at 5214.322 kb on + strand at 5214.322 kb on + strand at 5214.330 kb on - strand at 5214.341 kb on - strand at 5214.371 kb on + strand at 5214.473 kb on - strand at 5214.597 kb on - strand at 5215.010 kb on - strand, within HSERO_RS22735 at 5215.173 kb on + strand, within HSERO_RS22735 at 5215.190 kb on + strand, within HSERO_RS22735 at 5215.198 kb on - strand, within HSERO_RS22735 at 5215.228 kb on - strand, within HSERO_RS22735 at 5215.228 kb on - strand, within HSERO_RS22735 at 5215.323 kb on - strand, within HSERO_RS22735 at 5215.421 kb on + strand, within HSERO_RS22735 at 5215.433 kb on + strand, within HSERO_RS22735 at 5215.487 kb on + strand, within HSERO_RS22735 at 5216.056 kb on + strand at 5216.100 kb on + strand at 5216.110 kb on + strand at 5216.233 kb on + strand at 5216.233 kb on - strand at 5216.304 kb on + strand, within HSERO_RS22740 at 5216.330 kb on + strand, within HSERO_RS22740 at 5216.403 kb on + strand, within HSERO_RS22740 at 5216.454 kb on + strand, within HSERO_RS22740 at 5216.504 kb on + strand, within HSERO_RS22740 at 5216.701 kb on - strand, within HSERO_RS22740 at 5216.859 kb on - strand, within HSERO_RS22740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 5,213,938 - HSERO_RS22730 0.78 +0.2 5,214,054 + HSERO_RS22730 0.87 +0.5 5,214,056 + HSERO_RS22730 0.87 +0.4 5,214,191 - +0.5 5,214,235 - -0.3 5,214,260 + -0.1 5,214,268 - -0.2 5,214,303 + +1.2 5,214,322 + +0.3 5,214,322 + +1.4 5,214,330 - -0.2 5,214,341 - -1.3 5,214,371 + +0.9 5,214,473 - +0.1 5,214,597 - +1.1 5,215,010 - HSERO_RS22735 0.24 +0.9 5,215,173 + HSERO_RS22735 0.37 +0.5 5,215,190 + HSERO_RS22735 0.38 +1.8 5,215,198 - HSERO_RS22735 0.39 -0.1 5,215,228 - HSERO_RS22735 0.41 -0.7 5,215,228 - HSERO_RS22735 0.41 +1.3 5,215,323 - HSERO_RS22735 0.48 +0.2 5,215,421 + HSERO_RS22735 0.56 -0.0 5,215,433 + HSERO_RS22735 0.57 +1.0 5,215,487 + HSERO_RS22735 0.61 +0.2 5,216,056 + -0.1 5,216,100 + +0.5 5,216,110 + -0.1 5,216,233 + +0.2 5,216,233 - +0.1 5,216,304 + HSERO_RS22740 0.16 +0.1 5,216,330 + HSERO_RS22740 0.19 +0.4 5,216,403 + HSERO_RS22740 0.27 -0.1 5,216,454 + HSERO_RS22740 0.32 -0.5 5,216,504 + HSERO_RS22740 0.38 -0.0 5,216,701 - HSERO_RS22740 0.59 -0.1 5,216,859 - HSERO_RS22740 0.76 +0.5
Or see this region's nucleotide sequence