Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22715 and HSERO_RS22720 are separated by 165 nucleotides HSERO_RS22720 and HSERO_RS22725 overlap by 17 nucleotides HSERO_RS22725 and HSERO_RS22730 are separated by 24 nucleotides
HSERO_RS22715: HSERO_RS22715 - aldo/keto reductase, at 5,209,441 to 5,210,475
_RS22715
HSERO_RS22720: HSERO_RS22720 - histidine kinase, at 5,210,641 to 5,212,170
_RS22720
HSERO_RS22725: HSERO_RS22725 - transcriptional regulator, at 5,212,154 to 5,212,867
_RS22725
HSERO_RS22730: HSERO_RS22730 - sugar ABC transporter substrate-binding protein, at 5,212,892 to 5,214,232
_RS22730
Position (kb) 5210
5211
5212
5213 Strain fitness (log2 ratio) -1
0
1 at 5209.766 kb on + strand, within HSERO_RS22715 at 5210.078 kb on - strand, within HSERO_RS22715 at 5210.080 kb on + strand, within HSERO_RS22715 at 5210.088 kb on - strand, within HSERO_RS22715 at 5210.088 kb on - strand, within HSERO_RS22715 at 5210.093 kb on - strand, within HSERO_RS22715 at 5210.331 kb on - strand, within HSERO_RS22715 at 5210.809 kb on - strand, within HSERO_RS22720 at 5210.822 kb on - strand, within HSERO_RS22720 at 5210.843 kb on - strand, within HSERO_RS22720 at 5210.926 kb on + strand, within HSERO_RS22720 at 5211.025 kb on + strand, within HSERO_RS22720 at 5211.125 kb on + strand, within HSERO_RS22720 at 5211.207 kb on + strand, within HSERO_RS22720 at 5211.320 kb on + strand, within HSERO_RS22720 at 5211.440 kb on - strand, within HSERO_RS22720 at 5211.504 kb on + strand, within HSERO_RS22720 at 5211.549 kb on + strand, within HSERO_RS22720 at 5211.580 kb on - strand, within HSERO_RS22720 at 5211.638 kb on - strand, within HSERO_RS22720 at 5211.705 kb on - strand, within HSERO_RS22720 at 5212.000 kb on - strand, within HSERO_RS22720 at 5212.000 kb on - strand, within HSERO_RS22720 at 5212.000 kb on - strand, within HSERO_RS22720 at 5212.209 kb on + strand at 5212.209 kb on + strand at 5212.306 kb on + strand, within HSERO_RS22725 at 5212.535 kb on - strand, within HSERO_RS22725 at 5212.548 kb on + strand, within HSERO_RS22725 at 5212.662 kb on + strand, within HSERO_RS22725 at 5212.672 kb on + strand, within HSERO_RS22725
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 5,209,766 + HSERO_RS22715 0.31 -0.2 5,210,078 - HSERO_RS22715 0.62 +0.2 5,210,080 + HSERO_RS22715 0.62 +0.2 5,210,088 - HSERO_RS22715 0.63 +0.3 5,210,088 - HSERO_RS22715 0.63 -0.7 5,210,093 - HSERO_RS22715 0.63 -0.2 5,210,331 - HSERO_RS22715 0.86 -0.5 5,210,809 - HSERO_RS22720 0.11 +0.5 5,210,822 - HSERO_RS22720 0.12 +0.6 5,210,843 - HSERO_RS22720 0.13 +0.8 5,210,926 + HSERO_RS22720 0.19 +0.1 5,211,025 + HSERO_RS22720 0.25 +0.7 5,211,125 + HSERO_RS22720 0.32 +0.2 5,211,207 + HSERO_RS22720 0.37 +1.0 5,211,320 + HSERO_RS22720 0.44 -0.7 5,211,440 - HSERO_RS22720 0.52 +0.1 5,211,504 + HSERO_RS22720 0.56 +0.8 5,211,549 + HSERO_RS22720 0.59 -0.1 5,211,580 - HSERO_RS22720 0.61 +0.4 5,211,638 - HSERO_RS22720 0.65 +0.9 5,211,705 - HSERO_RS22720 0.70 +1.4 5,212,000 - HSERO_RS22720 0.89 -0.8 5,212,000 - HSERO_RS22720 0.89 +0.6 5,212,000 - HSERO_RS22720 0.89 +0.4 5,212,209 + -0.7 5,212,209 + +0.7 5,212,306 + HSERO_RS22725 0.21 +1.4 5,212,535 - HSERO_RS22725 0.53 -0.1 5,212,548 + HSERO_RS22725 0.55 +0.2 5,212,662 + HSERO_RS22725 0.71 +0.3 5,212,672 + HSERO_RS22725 0.73 +0.9
Or see this region's nucleotide sequence