Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22460 and HSERO_RS22465 are separated by 102 nucleotides HSERO_RS22465 and HSERO_RS22470 are separated by 49 nucleotides
HSERO_RS22460: HSERO_RS22460 - xylose ABC transporter substrate-binding protein, at 5,140,628 to 5,141,644
_RS22460
HSERO_RS22465: HSERO_RS22465 - sugar ABC transporter, at 5,141,747 to 5,143,303
_RS22465
HSERO_RS22470: HSERO_RS22470 - D-xylose ABC transporter permease, at 5,143,353 to 5,144,486
_RS22470
Position (kb) 5141
5142
5143
5144 Strain fitness (log2 ratio) -1
0
1 at 5140.887 kb on + strand, within HSERO_RS22460 at 5140.887 kb on + strand, within HSERO_RS22460 at 5140.895 kb on - strand, within HSERO_RS22460 at 5140.948 kb on + strand, within HSERO_RS22460 at 5140.970 kb on - strand, within HSERO_RS22460 at 5141.051 kb on - strand, within HSERO_RS22460 at 5141.152 kb on - strand at 5141.172 kb on - strand, within HSERO_RS22460 at 5141.468 kb on + strand, within HSERO_RS22460 at 5141.562 kb on + strand at 5141.927 kb on - strand, within HSERO_RS22465 at 5142.069 kb on + strand, within HSERO_RS22465 at 5142.074 kb on + strand, within HSERO_RS22465 at 5142.097 kb on - strand, within HSERO_RS22465 at 5142.228 kb on + strand, within HSERO_RS22465 at 5142.582 kb on - strand, within HSERO_RS22465 at 5142.638 kb on - strand, within HSERO_RS22465 at 5142.699 kb on + strand, within HSERO_RS22465 at 5142.797 kb on + strand, within HSERO_RS22465 at 5142.823 kb on - strand, within HSERO_RS22465 at 5142.835 kb on - strand, within HSERO_RS22465 at 5142.895 kb on + strand, within HSERO_RS22465 at 5143.021 kb on + strand, within HSERO_RS22465 at 5143.113 kb on - strand, within HSERO_RS22465 at 5143.118 kb on - strand, within HSERO_RS22465 at 5143.285 kb on + strand at 5143.370 kb on + strand at 5143.473 kb on + strand, within HSERO_RS22470 at 5143.535 kb on - strand, within HSERO_RS22470 at 5143.669 kb on + strand, within HSERO_RS22470 at 5143.687 kb on - strand, within HSERO_RS22470 at 5143.861 kb on + strand, within HSERO_RS22470 at 5143.869 kb on - strand, within HSERO_RS22470 at 5143.871 kb on + strand, within HSERO_RS22470 at 5143.958 kb on + strand, within HSERO_RS22470 at 5143.978 kb on + strand, within HSERO_RS22470 at 5143.993 kb on - strand, within HSERO_RS22470 at 5144.069 kb on - strand, within HSERO_RS22470 at 5144.219 kb on + strand, within HSERO_RS22470
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 5,140,887 + HSERO_RS22460 0.25 +0.2 5,140,887 + HSERO_RS22460 0.25 +0.4 5,140,895 - HSERO_RS22460 0.26 +0.8 5,140,948 + HSERO_RS22460 0.31 +0.3 5,140,970 - HSERO_RS22460 0.34 -0.0 5,141,051 - HSERO_RS22460 0.42 +0.6 5,141,152 - +0.5 5,141,172 - HSERO_RS22460 0.53 +0.5 5,141,468 + HSERO_RS22460 0.83 -1.6 5,141,562 + +0.3 5,141,927 - HSERO_RS22465 0.12 +1.3 5,142,069 + HSERO_RS22465 0.21 +1.1 5,142,074 + HSERO_RS22465 0.21 +0.9 5,142,097 - HSERO_RS22465 0.22 +0.5 5,142,228 + HSERO_RS22465 0.31 +0.6 5,142,582 - HSERO_RS22465 0.54 +1.5 5,142,638 - HSERO_RS22465 0.57 +0.7 5,142,699 + HSERO_RS22465 0.61 +0.6 5,142,797 + HSERO_RS22465 0.67 +0.5 5,142,823 - HSERO_RS22465 0.69 +1.1 5,142,835 - HSERO_RS22465 0.70 -0.0 5,142,895 + HSERO_RS22465 0.74 +0.7 5,143,021 + HSERO_RS22465 0.82 +0.5 5,143,113 - HSERO_RS22465 0.88 +1.2 5,143,118 - HSERO_RS22465 0.88 +1.3 5,143,285 + -0.3 5,143,370 + +0.2 5,143,473 + HSERO_RS22470 0.11 +0.2 5,143,535 - HSERO_RS22470 0.16 +0.5 5,143,669 + HSERO_RS22470 0.28 +0.6 5,143,687 - HSERO_RS22470 0.29 +0.3 5,143,861 + HSERO_RS22470 0.45 +0.3 5,143,869 - HSERO_RS22470 0.46 +1.7 5,143,871 + HSERO_RS22470 0.46 -0.1 5,143,958 + HSERO_RS22470 0.53 +0.7 5,143,978 + HSERO_RS22470 0.55 +0.4 5,143,993 - HSERO_RS22470 0.56 +0.5 5,144,069 - HSERO_RS22470 0.63 +0.4 5,144,219 + HSERO_RS22470 0.76 +0.1
Or see this region's nucleotide sequence