Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21515 and HSERO_RS21520 are separated by 71 nucleotides HSERO_RS21520 and HSERO_RS21525 are separated by 43 nucleotides HSERO_RS21525 and HSERO_RS21530 are separated by 247 nucleotides
HSERO_RS21515: HSERO_RS21515 - membrane protein, at 4,923,618 to 4,924,760
_RS21515
HSERO_RS21520: HSERO_RS21520 - ferredoxin, at 4,924,832 to 4,925,152
_RS21520
HSERO_RS21525: HSERO_RS21525 - alpha/beta hydrolase, at 4,925,196 to 4,925,858
_RS21525
HSERO_RS21530: HSERO_RS21530 - cytochrome C550, at 4,926,106 to 4,927,260
_RS21530
Position (kb) 4925
4926 Strain fitness (log2 ratio) -2
-1
0
1 at 4924.262 kb on + strand, within HSERO_RS21515 at 4924.297 kb on - strand, within HSERO_RS21515 at 4924.334 kb on - strand, within HSERO_RS21515 at 4924.469 kb on + strand, within HSERO_RS21515 at 4924.544 kb on + strand, within HSERO_RS21515 at 4924.590 kb on - strand, within HSERO_RS21515 at 4924.703 kb on - strand at 4924.708 kb on - strand at 4925.070 kb on + strand, within HSERO_RS21520 at 4925.129 kb on + strand at 4925.129 kb on + strand at 4925.193 kb on + strand at 4925.254 kb on + strand at 4925.429 kb on + strand, within HSERO_RS21525 at 4925.437 kb on - strand, within HSERO_RS21525 at 4925.437 kb on - strand, within HSERO_RS21525 at 4925.668 kb on + strand, within HSERO_RS21525 at 4926.395 kb on + strand, within HSERO_RS21530 at 4926.605 kb on - strand, within HSERO_RS21530 at 4926.617 kb on - strand, within HSERO_RS21530 at 4926.640 kb on - strand, within HSERO_RS21530 at 4926.781 kb on + strand, within HSERO_RS21530
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 4,924,262 + HSERO_RS21515 0.56 -0.2 4,924,297 - HSERO_RS21515 0.59 -0.9 4,924,334 - HSERO_RS21515 0.63 -2.3 4,924,469 + HSERO_RS21515 0.74 -0.4 4,924,544 + HSERO_RS21515 0.81 +0.1 4,924,590 - HSERO_RS21515 0.85 +1.1 4,924,703 - +0.1 4,924,708 - -0.5 4,925,070 + HSERO_RS21520 0.74 +0.7 4,925,129 + +0.0 4,925,129 + -0.1 4,925,193 + -0.1 4,925,254 + +0.9 4,925,429 + HSERO_RS21525 0.35 +1.0 4,925,437 - HSERO_RS21525 0.36 +0.1 4,925,437 - HSERO_RS21525 0.36 -0.4 4,925,668 + HSERO_RS21525 0.71 +1.7 4,926,395 + HSERO_RS21530 0.25 -0.1 4,926,605 - HSERO_RS21530 0.43 -0.9 4,926,617 - HSERO_RS21530 0.44 +0.1 4,926,640 - HSERO_RS21530 0.46 +0.6 4,926,781 + HSERO_RS21530 0.58 +0.2
Or see this region's nucleotide sequence