Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21015 and HSERO_RS21020 are separated by 2 nucleotides HSERO_RS21020 and HSERO_RS21025 overlap by 4 nucleotides HSERO_RS21025 and HSERO_RS21030 are separated by 304 nucleotides HSERO_RS21030 and HSERO_RS21035 are separated by 74 nucleotides
HSERO_RS21015: HSERO_RS21015 - imidazole glycerol phosphate synthase, at 4,809,112 to 4,809,720
_RS21015
HSERO_RS21020: HSERO_RS21020 - imidazole glycerol phosphate synthase, at 4,809,723 to 4,810,484
_RS21020
HSERO_RS21025: HSERO_RS21025 - hypothetical protein, at 4,810,481 to 4,811,197
_RS21025
HSERO_RS21030: HSERO_RS21030 - hypothetical protein, at 4,811,502 to 4,812,011
_RS21030
HSERO_RS21035: HSERO_RS21035 - hypothetical protein, at 4,812,086 to 4,812,700
_RS21035
Position (kb) 4810
4811
4812 Strain fitness (log2 ratio) -2
-1
0
1 at 4809.596 kb on - strand, within HSERO_RS21015 at 4809.611 kb on - strand, within HSERO_RS21015 at 4809.667 kb on + strand at 4809.722 kb on - strand at 4809.722 kb on - strand at 4809.737 kb on + strand at 4809.826 kb on - strand, within HSERO_RS21020 at 4809.883 kb on - strand, within HSERO_RS21020 at 4809.930 kb on + strand, within HSERO_RS21020 at 4809.968 kb on + strand, within HSERO_RS21020 at 4809.996 kb on + strand, within HSERO_RS21020 at 4810.099 kb on - strand, within HSERO_RS21020 at 4810.229 kb on + strand, within HSERO_RS21020 at 4810.410 kb on - strand at 4810.481 kb on - strand at 4810.571 kb on - strand, within HSERO_RS21025 at 4810.601 kb on + strand, within HSERO_RS21025 at 4810.610 kb on + strand, within HSERO_RS21025 at 4810.664 kb on - strand, within HSERO_RS21025 at 4810.701 kb on + strand, within HSERO_RS21025 at 4811.033 kb on + strand, within HSERO_RS21025 at 4811.219 kb on - strand at 4811.245 kb on + strand at 4811.943 kb on + strand, within HSERO_RS21030 at 4811.983 kb on + strand at 4812.130 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 4,809,596 - HSERO_RS21015 0.79 -0.5 4,809,611 - HSERO_RS21015 0.82 -0.0 4,809,667 + +0.1 4,809,722 - +0.1 4,809,722 - +0.6 4,809,737 + -0.2 4,809,826 - HSERO_RS21020 0.14 -0.4 4,809,883 - HSERO_RS21020 0.21 -0.4 4,809,930 + HSERO_RS21020 0.27 -0.7 4,809,968 + HSERO_RS21020 0.32 +0.1 4,809,996 + HSERO_RS21020 0.36 +0.5 4,810,099 - HSERO_RS21020 0.49 +0.5 4,810,229 + HSERO_RS21020 0.66 -0.3 4,810,410 - -1.5 4,810,481 - -2.1 4,810,571 - HSERO_RS21025 0.13 +0.5 4,810,601 + HSERO_RS21025 0.17 +0.9 4,810,610 + HSERO_RS21025 0.18 +0.8 4,810,664 - HSERO_RS21025 0.26 +0.6 4,810,701 + HSERO_RS21025 0.31 -0.1 4,811,033 + HSERO_RS21025 0.77 +0.6 4,811,219 - +0.8 4,811,245 + +0.2 4,811,943 + HSERO_RS21030 0.86 +1.2 4,811,983 + +0.7 4,812,130 + +0.1
Or see this region's nucleotide sequence