Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19515 and HSERO_RS19520 are separated by 334 nucleotides HSERO_RS19520 and HSERO_RS19525 are separated by 288 nucleotides HSERO_RS19525 and HSERO_RS19530 are separated by 46 nucleotides
HSERO_RS19515: HSERO_RS19515 - 7-cyano-7-deazaguanine reductase, at 4,473,820 to 4,474,695
_RS19515
HSERO_RS19520: HSERO_RS19520 - hypothetical protein, at 4,475,030 to 4,475,644
_RS19520
HSERO_RS19525: HSERO_RS19525 - PTS sugar transporter subunit IIA, at 4,475,933 to 4,476,406
_RS19525
HSERO_RS19530: HSERO_RS19530 - HPr kinase, at 4,476,453 to 4,477,391
_RS19530
Position (kb) 4475
4476 Strain fitness (log2 ratio) -2
-1
0
1 at 4474.471 kb on + strand, within HSERO_RS19515 at 4474.543 kb on - strand, within HSERO_RS19515 at 4474.691 kb on + strand at 4474.731 kb on + strand at 4474.744 kb on - strand at 4474.832 kb on + strand at 4474.869 kb on + strand at 4474.921 kb on + strand at 4474.929 kb on - strand at 4474.972 kb on + strand at 4474.980 kb on - strand at 4475.001 kb on + strand at 4475.009 kb on - strand at 4475.009 kb on - strand at 4475.009 kb on - strand at 4475.009 kb on - strand at 4475.158 kb on + strand, within HSERO_RS19520 at 4475.197 kb on + strand, within HSERO_RS19520 at 4475.353 kb on - strand, within HSERO_RS19520 at 4475.445 kb on + strand at 4475.707 kb on - strand at 4475.712 kb on - strand at 4475.766 kb on + strand at 4475.903 kb on + strand at 4476.279 kb on - strand, within HSERO_RS19525 at 4476.298 kb on + strand, within HSERO_RS19525 at 4476.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 4,474,471 + HSERO_RS19515 0.74 -0.6 4,474,543 - HSERO_RS19515 0.83 +0.5 4,474,691 + +0.9 4,474,731 + +0.9 4,474,744 - +0.0 4,474,832 + -0.5 4,474,869 + +0.9 4,474,921 + -0.1 4,474,929 - +0.0 4,474,972 + -0.2 4,474,980 - -0.1 4,475,001 + +0.0 4,475,009 - +0.0 4,475,009 - -0.2 4,475,009 - -0.5 4,475,009 - -1.2 4,475,158 + HSERO_RS19520 0.21 -0.2 4,475,197 + HSERO_RS19520 0.27 +1.2 4,475,353 - HSERO_RS19520 0.53 +0.3 4,475,445 + -1.2 4,475,707 - +0.3 4,475,712 - -0.3 4,475,766 + +0.2 4,475,903 + +0.2 4,476,279 - HSERO_RS19525 0.73 -2.6 4,476,298 + HSERO_RS19525 0.77 -1.4 4,476,416 + -0.3
Or see this region's nucleotide sequence