Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS07265 and HSERO_RS07270 are separated by 34 nucleotides HSERO_RS07270 and HSERO_RS07275 are separated by 136 nucleotides HSERO_RS07275 and HSERO_RS07280 are separated by 192 nucleotides HSERO_RS07280 and HSERO_RS07285 are separated by 30 nucleotides
HSERO_RS07265: HSERO_RS07265 - aspartyl/asparaginyl beta-hydroxylase AspH, at 1,663,260 to 1,664,159
_RS07265
HSERO_RS07270: HSERO_RS07270 - hypothetical protein, at 1,664,194 to 1,664,373
_RS07270
HSERO_RS07275: HSERO_RS07275 - D-amino acid dehydrogenase, at 1,664,510 to 1,665,820
_RS07275
HSERO_RS07280: HSERO_RS07280 - hypothetical protein, at 1,666,013 to 1,666,453
_RS07280
HSERO_RS07285: HSERO_RS07285 - DNA polymerase III subunit chi, at 1,666,484 to 1,666,903
_RS07285
Position (kb) 1664
1665
1666 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1663.550 kb on - strand, within HSERO_RS07265 at 1663.600 kb on + strand, within HSERO_RS07265 at 1663.600 kb on + strand, within HSERO_RS07265 at 1663.742 kb on + strand, within HSERO_RS07265 at 1663.863 kb on + strand, within HSERO_RS07265 at 1663.903 kb on - strand, within HSERO_RS07265 at 1663.919 kb on + strand, within HSERO_RS07265 at 1663.919 kb on + strand, within HSERO_RS07265 at 1663.921 kb on + strand, within HSERO_RS07265 at 1663.945 kb on + strand, within HSERO_RS07265 at 1664.428 kb on + strand at 1664.506 kb on - strand at 1664.779 kb on + strand, within HSERO_RS07275 at 1664.852 kb on + strand, within HSERO_RS07275 at 1664.979 kb on + strand, within HSERO_RS07275 at 1664.979 kb on + strand, within HSERO_RS07275 at 1665.199 kb on - strand, within HSERO_RS07275 at 1665.199 kb on - strand, within HSERO_RS07275 at 1665.396 kb on + strand, within HSERO_RS07275 at 1665.404 kb on + strand, within HSERO_RS07275 at 1665.593 kb on + strand, within HSERO_RS07275 at 1666.138 kb on - strand, within HSERO_RS07280 at 1666.146 kb on + strand, within HSERO_RS07280 at 1666.380 kb on - strand, within HSERO_RS07280 at 1666.472 kb on + strand at 1666.515 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 1,663,550 - HSERO_RS07265 0.32 +0.2 1,663,600 + HSERO_RS07265 0.38 +0.4 1,663,600 + HSERO_RS07265 0.38 +0.3 1,663,742 + HSERO_RS07265 0.54 +0.3 1,663,863 + HSERO_RS07265 0.67 +0.2 1,663,903 - HSERO_RS07265 0.71 +0.3 1,663,919 + HSERO_RS07265 0.73 +0.5 1,663,919 + HSERO_RS07265 0.73 +1.0 1,663,921 + HSERO_RS07265 0.73 +0.2 1,663,945 + HSERO_RS07265 0.76 +0.5 1,664,428 + +1.3 1,664,506 - -2.6 1,664,779 + HSERO_RS07275 0.21 +0.9 1,664,852 + HSERO_RS07275 0.26 +1.7 1,664,979 + HSERO_RS07275 0.36 +2.7 1,664,979 + HSERO_RS07275 0.36 +0.7 1,665,199 - HSERO_RS07275 0.53 +2.2 1,665,199 - HSERO_RS07275 0.53 +0.3 1,665,396 + HSERO_RS07275 0.68 +1.1 1,665,404 + HSERO_RS07275 0.68 +0.4 1,665,593 + HSERO_RS07275 0.83 +0.2 1,666,138 - HSERO_RS07280 0.28 -0.6 1,666,146 + HSERO_RS07280 0.30 +1.1 1,666,380 - HSERO_RS07280 0.83 +0.4 1,666,472 + -0.4 1,666,515 - -0.6
Or see this region's nucleotide sequence