Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01490 and HSERO_RS01495 are separated by 600 nucleotides HSERO_RS01495 and HSERO_RS01500 are separated by 116 nucleotides HSERO_RS01500 and HSERO_RS01505 overlap by 4 nucleotides
HSERO_RS01490: HSERO_RS01490 - guanylate cyclase, at 320,928 to 323,201
_RS01490
HSERO_RS01495: HSERO_RS01495 - Fe-S osidoreductase, at 323,802 to 325,328
_RS01495
HSERO_RS01500: HSERO_RS01500 - transketolase, at 325,445 to 326,263
_RS01500
HSERO_RS01505: HSERO_RS01505 - transketolase, at 326,260 to 327,225
_RS01505
Position (kb) 323
324
325
326 Strain fitness (log2 ratio) -2
-1
0
1 at 322.852 kb on - strand, within HSERO_RS01490 at 322.917 kb on + strand, within HSERO_RS01490 at 322.942 kb on - strand, within HSERO_RS01490 at 322.990 kb on + strand at 323.039 kb on + strand at 323.166 kb on + strand at 323.184 kb on - strand at 323.200 kb on - strand at 323.200 kb on - strand at 323.218 kb on + strand at 323.229 kb on - strand at 323.238 kb on - strand at 323.346 kb on + strand at 323.369 kb on - strand at 323.492 kb on - strand at 323.657 kb on + strand at 323.665 kb on - strand at 323.762 kb on + strand at 323.766 kb on - strand at 323.770 kb on - strand at 323.813 kb on + strand at 323.821 kb on - strand at 323.835 kb on + strand at 323.976 kb on - strand, within HSERO_RS01495 at 324.140 kb on + strand, within HSERO_RS01495 at 324.260 kb on + strand, within HSERO_RS01495 at 324.268 kb on - strand, within HSERO_RS01495 at 324.268 kb on - strand at 324.329 kb on + strand, within HSERO_RS01495 at 324.567 kb on + strand, within HSERO_RS01495 at 324.634 kb on + strand, within HSERO_RS01495 at 324.689 kb on + strand, within HSERO_RS01495 at 324.697 kb on - strand, within HSERO_RS01495 at 324.804 kb on + strand, within HSERO_RS01495 at 324.971 kb on + strand, within HSERO_RS01495 at 324.971 kb on + strand, within HSERO_RS01495 at 325.065 kb on + strand, within HSERO_RS01495 at 325.067 kb on + strand, within HSERO_RS01495 at 325.166 kb on - strand, within HSERO_RS01495 at 325.348 kb on - strand at 325.388 kb on + strand at 325.803 kb on + strand, within HSERO_RS01500 at 325.811 kb on - strand, within HSERO_RS01500 at 325.816 kb on - strand, within HSERO_RS01500 at 325.877 kb on - strand, within HSERO_RS01500 at 326.145 kb on - strand, within HSERO_RS01500 at 326.145 kb on - strand, within HSERO_RS01500 at 326.225 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 3 days remove 322,852 - HSERO_RS01490 0.85 -0.1 322,917 + HSERO_RS01490 0.87 +0.3 322,942 - HSERO_RS01490 0.89 +0.5 322,990 + -0.1 323,039 + +0.1 323,166 + +0.4 323,184 - -1.4 323,200 - +0.0 323,200 - -0.3 323,218 + +0.4 323,229 - -1.1 323,238 - +0.4 323,346 + +0.5 323,369 - +0.4 323,492 - -1.1 323,657 + -0.1 323,665 - -0.3 323,762 + -0.1 323,766 - -0.4 323,770 - -0.6 323,813 + -0.2 323,821 - +0.2 323,835 + -0.5 323,976 - HSERO_RS01495 0.11 -0.2 324,140 + HSERO_RS01495 0.22 +0.0 324,260 + HSERO_RS01495 0.30 +0.4 324,268 - HSERO_RS01495 0.31 -0.4 324,268 - -1.6 324,329 + HSERO_RS01495 0.35 -0.7 324,567 + HSERO_RS01495 0.50 -0.1 324,634 + HSERO_RS01495 0.54 +0.1 324,689 + HSERO_RS01495 0.58 -2.3 324,697 - HSERO_RS01495 0.59 +0.1 324,804 + HSERO_RS01495 0.66 -0.4 324,971 + HSERO_RS01495 0.77 +0.1 324,971 + HSERO_RS01495 0.77 -0.0 325,065 + HSERO_RS01495 0.83 -0.3 325,067 + HSERO_RS01495 0.83 +0.3 325,166 - HSERO_RS01495 0.89 -0.1 325,348 - -0.2 325,388 + -0.3 325,803 + HSERO_RS01500 0.44 -0.9 325,811 - HSERO_RS01500 0.45 -1.1 325,816 - HSERO_RS01500 0.45 -0.8 325,877 - HSERO_RS01500 0.53 -1.7 326,145 - HSERO_RS01500 0.85 -1.7 326,145 - HSERO_RS01500 0.85 -0.6 326,225 - -1.2
Or see this region's nucleotide sequence