Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0524 and DVU0525 are separated by 217 nucleotides DVU0525 and DVU0526 overlap by 8 nucleotides DVU0526 and maF are separated by 100 nucleotides maF and pgpA overlap by 8 nucleotides
DVU0524: DVU0524 - hypothetical protein (TIGR), at 597,634 to 598,050
DVU0524
DVU0525: DVU0525 - transcriptional regulator, MarR family (TIGR), at 598,268 to 598,936
DVU0525
DVU0526: DVU0526 - drug resistance transporter, putative (TIGR), at 598,929 to 600,332
DVU0526
DVU0527: maF - septum formation protein Maf (TIGR), at 600,433 to 601,065
maF
DVU0528: pgpA - phosphatidylglycerophosphatase (TIGR), at 601,058 to 601,537
pgpA
Position (kb) 598
599
600
601 Strain fitness (log2 ratio) -2
-1
0
1
2 at 598.012 kb on - strand at 598.090 kb on - strand at 598.278 kb on - strand at 598.318 kb on + strand at 598.345 kb on - strand, within DVU0525 at 598.367 kb on - strand, within DVU0525 at 598.426 kb on - strand, within DVU0525 at 598.432 kb on + strand, within DVU0525 at 598.483 kb on + strand, within DVU0525 at 598.499 kb on + strand, within DVU0525 at 598.552 kb on - strand, within DVU0525 at 598.647 kb on + strand, within DVU0525 at 598.698 kb on + strand, within DVU0525 at 598.706 kb on - strand, within DVU0525 at 598.728 kb on - strand, within DVU0525 at 598.746 kb on - strand, within DVU0525 at 598.771 kb on + strand, within DVU0525 at 598.771 kb on + strand, within DVU0525 at 598.783 kb on - strand, within DVU0525 at 598.813 kb on - strand, within DVU0525 at 598.843 kb on - strand, within DVU0525 at 598.851 kb on + strand, within DVU0525 at 598.856 kb on + strand, within DVU0525 at 598.856 kb on + strand, within DVU0525 at 598.856 kb on + strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.864 kb on - strand, within DVU0525 at 598.920 kb on + strand at 598.925 kb on + strand at 598.943 kb on + strand at 598.974 kb on + strand at 598.977 kb on + strand at 598.999 kb on - strand at 599.024 kb on + strand at 599.039 kb on - strand at 599.045 kb on - strand at 599.106 kb on + strand, within DVU0526 at 599.201 kb on + strand, within DVU0526 at 599.207 kb on - strand, within DVU0526 at 599.229 kb on - strand, within DVU0526 at 599.244 kb on + strand, within DVU0526 at 599.249 kb on + strand, within DVU0526 at 599.252 kb on - strand, within DVU0526 at 599.268 kb on + strand, within DVU0526 at 599.268 kb on + strand, within DVU0526 at 599.268 kb on + strand, within DVU0526 at 599.276 kb on - strand, within DVU0526 at 599.276 kb on - strand, within DVU0526 at 599.281 kb on - strand, within DVU0526 at 599.283 kb on - strand, within DVU0526 at 599.331 kb on - strand, within DVU0526 at 599.340 kb on + strand, within DVU0526 at 599.375 kb on + strand, within DVU0526 at 599.447 kb on - strand, within DVU0526 at 599.528 kb on + strand, within DVU0526 at 599.535 kb on + strand, within DVU0526 at 599.566 kb on - strand, within DVU0526 at 599.656 kb on - strand, within DVU0526 at 599.717 kb on + strand, within DVU0526 at 599.764 kb on + strand, within DVU0526 at 599.807 kb on + strand, within DVU0526 at 599.807 kb on + strand, within DVU0526 at 599.807 kb on + strand, within DVU0526 at 599.815 kb on - strand, within DVU0526 at 599.815 kb on - strand, within DVU0526 at 599.817 kb on + strand, within DVU0526 at 599.865 kb on - strand, within DVU0526 at 599.950 kb on - strand, within DVU0526 at 600.021 kb on + strand, within DVU0526 at 600.062 kb on + strand, within DVU0526 at 600.067 kb on + strand, within DVU0526 at 600.133 kb on - strand, within DVU0526 at 600.146 kb on + strand, within DVU0526 at 600.156 kb on - strand, within DVU0526 at 600.199 kb on - strand at 600.222 kb on - strand at 600.245 kb on + strand at 600.256 kb on + strand at 600.321 kb on + strand at 600.326 kb on + strand at 600.406 kb on + strand at 600.406 kb on + strand at 600.406 kb on + strand at 600.408 kb on + strand at 600.443 kb on - strand at 600.448 kb on - strand at 600.462 kb on + strand at 600.519 kb on + strand, within maF at 600.539 kb on - strand, within maF at 600.566 kb on + strand, within maF at 600.623 kb on - strand, within maF at 600.642 kb on + strand, within maF at 600.648 kb on - strand, within maF at 600.677 kb on - strand, within maF at 600.692 kb on + strand, within maF at 600.726 kb on + strand, within maF at 600.775 kb on + strand, within maF at 600.822 kb on - strand, within maF at 600.932 kb on - strand, within maF
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 598,012 - +1.3 598,090 - +0.2 598,278 - -0.0 598,318 + +0.0 598,345 - DVU0525 0.12 -0.1 598,367 - DVU0525 0.15 -2.6 598,426 - DVU0525 0.24 -0.0 598,432 + DVU0525 0.25 +0.1 598,483 + DVU0525 0.32 -0.5 598,499 + DVU0525 0.35 +0.1 598,552 - DVU0525 0.42 +0.2 598,647 + DVU0525 0.57 -0.5 598,698 + DVU0525 0.64 -1.0 598,706 - DVU0525 0.65 -0.8 598,728 - DVU0525 0.69 -0.2 598,746 - DVU0525 0.71 -0.4 598,771 + DVU0525 0.75 +0.4 598,771 + DVU0525 0.75 +0.4 598,783 - DVU0525 0.77 -0.6 598,813 - DVU0525 0.81 -0.3 598,843 - DVU0525 0.86 +0.5 598,851 + DVU0525 0.87 +1.6 598,856 + DVU0525 0.88 -0.1 598,856 + DVU0525 0.88 -0.4 598,856 + DVU0525 0.88 -0.4 598,864 - DVU0525 0.89 +0.9 598,864 - DVU0525 0.89 +0.5 598,864 - DVU0525 0.89 +0.5 598,864 - DVU0525 0.89 +0.4 598,864 - DVU0525 0.89 -1.0 598,864 - DVU0525 0.89 -1.2 598,920 + -0.1 598,925 + +2.2 598,943 + +0.1 598,974 + -0.4 598,977 + -0.4 598,999 - +0.4 599,024 + +0.7 599,039 - +0.1 599,045 - +0.6 599,106 + DVU0526 0.13 -0.5 599,201 + DVU0526 0.19 -0.2 599,207 - DVU0526 0.20 +0.2 599,229 - DVU0526 0.21 +0.0 599,244 + DVU0526 0.22 +0.0 599,249 + DVU0526 0.23 +0.7 599,252 - DVU0526 0.23 +1.2 599,268 + DVU0526 0.24 -0.5 599,268 + DVU0526 0.24 +0.4 599,268 + DVU0526 0.24 +0.3 599,276 - DVU0526 0.25 -0.2 599,276 - DVU0526 0.25 +0.4 599,281 - DVU0526 0.25 +0.8 599,283 - DVU0526 0.25 +0.5 599,331 - DVU0526 0.29 -0.1 599,340 + DVU0526 0.29 -0.5 599,375 + DVU0526 0.32 -1.3 599,447 - DVU0526 0.37 -0.4 599,528 + DVU0526 0.43 +0.1 599,535 + DVU0526 0.43 -1.9 599,566 - DVU0526 0.45 -0.3 599,656 - DVU0526 0.52 +0.1 599,717 + DVU0526 0.56 +0.3 599,764 + DVU0526 0.59 +0.1 599,807 + DVU0526 0.63 +0.1 599,807 + DVU0526 0.63 -0.3 599,807 + DVU0526 0.63 +0.4 599,815 - DVU0526 0.63 +0.2 599,815 - DVU0526 0.63 +0.3 599,817 + DVU0526 0.63 +0.6 599,865 - DVU0526 0.67 +0.7 599,950 - DVU0526 0.73 +2.3 600,021 + DVU0526 0.78 -0.7 600,062 + DVU0526 0.81 -0.0 600,067 + DVU0526 0.81 +0.2 600,133 - DVU0526 0.86 +0.1 600,146 + DVU0526 0.87 -0.3 600,156 - DVU0526 0.87 -0.1 600,199 - +0.9 600,222 - +1.1 600,245 + -0.1 600,256 + +0.2 600,321 + -0.6 600,326 + +1.0 600,406 + -1.7 600,406 + -0.6 600,406 + +0.7 600,408 + -0.3 600,443 - -0.4 600,448 - -0.1 600,462 + -0.2 600,519 + maF DVU0527 0.14 +0.0 600,539 - maF DVU0527 0.17 +0.3 600,566 + maF DVU0527 0.21 +0.2 600,623 - maF DVU0527 0.30 -0.0 600,642 + maF DVU0527 0.33 -0.1 600,648 - maF DVU0527 0.34 -0.1 600,677 - maF DVU0527 0.39 -1.7 600,692 + maF DVU0527 0.41 -0.2 600,726 + maF DVU0527 0.46 +0.2 600,775 + maF DVU0527 0.54 +1.1 600,822 - maF DVU0527 0.61 +0.7 600,932 - maF DVU0527 0.79 -0.2
Or see this region's nucleotide sequence