Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0189 and DVU0190 overlap by 4 nucleotides DVU0190 and DVU0191 are separated by 57 nucleotides DVU0191 and DVU0192 are separated by 126 nucleotides
DVU0189: DVU0189 - phage/plasmid primase, P4 family (TIGR), at 233,752 to 235,437
DVU0189
DVU0190: DVU0190 - hypothetical protein (TIGR), at 235,434 to 235,646
DVU0190
DVU0191: DVU0191 - conserved hypothetical protein (TIGR), at 235,704 to 237,263
DVU0191
DVU0192: DVU0192 - adenine specific DNA methyltransferase, putative (TIGR), at 237,390 to 238,748
DVU0192
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -2
-1
0
1
2 at 235.369 kb on + strand at 235.453 kb on + strand at 235.748 kb on + strand at 235.788 kb on + strand at 235.796 kb on - strand at 236.030 kb on + strand, within DVU0191 at 236.066 kb on + strand, within DVU0191 at 236.087 kb on + strand, within DVU0191 at 236.087 kb on + strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.095 kb on - strand, within DVU0191 at 236.146 kb on + strand, within DVU0191 at 236.179 kb on + strand, within DVU0191 at 236.187 kb on - strand, within DVU0191 at 236.968 kb on + strand, within DVU0191 at 236.976 kb on - strand, within DVU0191 at 236.976 kb on - strand, within DVU0191 at 236.994 kb on + strand, within DVU0191 at 237.160 kb on - strand at 237.165 kb on - strand at 237.208 kb on + strand at 237.271 kb on + strand at 237.271 kb on + strand at 237.271 kb on + strand at 237.308 kb on - strand at 237.427 kb on + strand at 237.476 kb on - strand at 237.543 kb on + strand, within DVU0192 at 237.563 kb on + strand, within DVU0192 at 237.771 kb on + strand, within DVU0192 at 237.778 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.844 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.869 kb on - strand, within DVU0192 at 237.984 kb on + strand, within DVU0192 at 238.075 kb on + strand, within DVU0192 at 238.186 kb on + strand, within DVU0192 at 238.192 kb on + strand, within DVU0192 at 238.209 kb on - strand, within DVU0192
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 235,369 + +0.2 235,453 + +0.0 235,748 + -0.1 235,788 + -1.5 235,796 - -0.0 236,030 + DVU0191 0.21 +0.2 236,066 + DVU0191 0.23 +0.0 236,087 + DVU0191 0.25 +0.2 236,087 + DVU0191 0.25 -0.1 236,095 - DVU0191 0.25 -0.2 236,095 - DVU0191 0.25 +0.4 236,095 - DVU0191 0.25 +0.4 236,095 - DVU0191 0.25 -1.8 236,146 + DVU0191 0.28 -0.1 236,179 + DVU0191 0.30 +0.5 236,187 - DVU0191 0.31 -0.1 236,968 + DVU0191 0.81 +0.4 236,976 - DVU0191 0.82 +0.8 236,976 - DVU0191 0.82 +0.4 236,994 + DVU0191 0.83 +0.3 237,160 - +2.7 237,165 - -0.1 237,208 + +1.1 237,271 + -0.6 237,271 + +1.2 237,271 + -0.1 237,308 - -0.1 237,427 + -0.0 237,476 - -0.2 237,543 + DVU0192 0.11 +0.4 237,563 + DVU0192 0.13 +0.1 237,771 + DVU0192 0.28 -0.0 237,778 - DVU0192 0.29 -0.4 237,798 - DVU0192 0.30 -0.1 237,798 - DVU0192 0.30 +0.5 237,844 - DVU0192 0.33 -1.1 237,854 - DVU0192 0.34 -0.4 237,854 - DVU0192 0.34 +0.4 237,869 - DVU0192 0.35 -0.3 237,984 + DVU0192 0.44 +1.1 238,075 + DVU0192 0.50 -0.2 238,186 + DVU0192 0.59 +1.8 238,192 + DVU0192 0.59 +0.0 238,209 - DVU0192 0.60 +0.7
Or see this region's nucleotide sequence