Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2838 and DVU2839 are separated by 0 nucleotides DVU2839 and DVU2840 are separated by 108 nucleotides DVU2840 and DVU2841 overlap by 1 nucleotides
DVU2838: DVU2838 - conserved hypothetical protein (TIGR), at 2,942,313 to 2,943,650
DVU2838
DVU2839: DVU2839 - conserved hypothetical protein (TIGR), at 2,943,651 to 2,944,175
DVU2839
DVU2840: DVU2840 - conserved hypothetical protein (TIGR), at 2,944,284 to 2,944,985
DVU2840
DVU2841: DVU2841 - type II restriction endonuclease, putative (TIGR), at 2,944,985 to 2,946,184
DVU2841
Position (kb)
2943
2944
2945 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2942.929 kb on + strand, within DVU2838 at 2943.142 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.226 kb on - strand, within DVU2838 at 2943.278 kb on + strand, within DVU2838 at 2943.286 kb on - strand, within DVU2838 at 2943.307 kb on + strand, within DVU2838 at 2943.529 kb on - strand at 2943.595 kb on - strand at 2943.709 kb on + strand, within DVU2839 at 2943.988 kb on + strand, within DVU2839 at 2944.091 kb on + strand, within DVU2839 at 2944.112 kb on + strand, within DVU2839 at 2944.803 kb on + strand, within DVU2840 at 2945.136 kb on - strand, within DVU2841
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 2,942,929 + DVU2838 0.46 +0.4 2,943,142 + DVU2838 0.62 +0.9 2,943,218 + DVU2838 0.68 -0.2 2,943,218 + DVU2838 0.68 -0.3 2,943,226 - DVU2838 0.68 +2.2 2,943,278 + DVU2838 0.72 -0.1 2,943,286 - DVU2838 0.73 +3.2 2,943,307 + DVU2838 0.74 +0.1 2,943,529 - -0.4 2,943,595 - +0.6 2,943,709 + DVU2839 0.11 +0.1 2,943,988 + DVU2839 0.64 -0.2 2,944,091 + DVU2839 0.84 +0.1 2,944,112 + DVU2839 0.88 +0.3 2,944,803 + DVU2840 0.74 +0.1 2,945,136 - DVU2841 0.13 -0.1
Or see this region's nucleotide sequence