Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2522 and DVU2523 are separated by 29 nucleotides DVU2523 and DVU2524 are separated by 435 nucleotides DVU2524 and hynB-2 are separated by 56 nucleotides hynB-2 and hynA-2 are separated by 12 nucleotides
DVU2522: DVU2522 - hypothetical protein (TIGR), at 2,634,024 to 2,634,626
DVU2522
DVU2523: DVU2523 - lipoprotein, putative (TIGR), at 2,634,656 to 2,635,132
DVU2523
DVU2524: DVU2524 - cytochrome c3, putative (TIGR), at 2,635,568 to 2,636,065
DVU2524
DVU2525: hynB-2 - periplasmic [NiFe] hydrogenase, small subunit, isozyme 2 (TIGR), at 2,636,122 to 2,637,036
hynB-2
DVU2526: hynA-2 - periplasmic [NiFe] hydrogenase, large subunit, isozyme 2 (TIGR), at 2,637,049 to 2,638,698
hynA-2
Position (kb)
2635
2636
2637 Strain fitness (log2 ratio)
-2
-1
0
1 at 2634.579 kb on + strand at 2634.587 kb on - strand at 2634.602 kb on + strand at 2634.610 kb on - strand at 2634.782 kb on + strand, within DVU2523 at 2634.800 kb on - strand, within DVU2523 at 2634.825 kb on - strand, within DVU2523 at 2634.907 kb on - strand, within DVU2523 at 2634.971 kb on - strand, within DVU2523 at 2635.198 kb on - strand at 2635.198 kb on - strand at 2635.385 kb on - strand at 2635.455 kb on - strand at 2635.468 kb on - strand at 2635.523 kb on - strand at 2635.532 kb on - strand at 2635.581 kb on + strand at 2635.673 kb on + strand, within DVU2524 at 2635.836 kb on - strand, within DVU2524 at 2635.850 kb on + strand, within DVU2524 at 2635.955 kb on + strand, within DVU2524 at 2635.962 kb on - strand, within DVU2524 at 2635.962 kb on - strand, within DVU2524 at 2636.039 kb on - strand at 2636.067 kb on - strand at 2636.106 kb on + strand at 2636.106 kb on - strand at 2636.137 kb on + strand at 2636.239 kb on + strand, within hynB-2 at 2636.242 kb on - strand, within hynB-2 at 2636.300 kb on + strand, within hynB-2 at 2636.331 kb on + strand, within hynB-2 at 2636.401 kb on - strand, within hynB-2 at 2636.421 kb on + strand, within hynB-2 at 2636.530 kb on - strand, within hynB-2 at 2636.546 kb on + strand, within hynB-2 at 2636.626 kb on - strand, within hynB-2 at 2636.679 kb on + strand, within hynB-2 at 2636.682 kb on + strand, within hynB-2 at 2636.714 kb on - strand, within hynB-2 at 2636.714 kb on - strand, within hynB-2 at 2636.720 kb on - strand, within hynB-2 at 2636.752 kb on + strand, within hynB-2 at 2636.768 kb on + strand, within hynB-2 at 2636.772 kb on - strand, within hynB-2 at 2636.796 kb on + strand, within hynB-2 at 2636.850 kb on - strand, within hynB-2 at 2636.890 kb on + strand, within hynB-2 at 2636.906 kb on - strand, within hynB-2 at 2636.949 kb on + strand at 2637.030 kb on + strand at 2637.038 kb on - strand at 2637.054 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 2,634,579 + -0.6 2,634,587 - -0.3 2,634,602 + -0.2 2,634,610 - +0.0 2,634,782 + DVU2523 0.26 -0.2 2,634,800 - DVU2523 0.30 +0.0 2,634,825 - DVU2523 0.35 -0.2 2,634,907 - DVU2523 0.53 +0.3 2,634,971 - DVU2523 0.66 -1.1 2,635,198 - -1.9 2,635,198 - +0.3 2,635,385 - +0.8 2,635,455 - -0.3 2,635,468 - +1.3 2,635,523 - +0.2 2,635,532 - +0.3 2,635,581 + -0.5 2,635,673 + DVU2524 0.21 +0.1 2,635,836 - DVU2524 0.54 -0.2 2,635,850 + DVU2524 0.57 +0.5 2,635,955 + DVU2524 0.78 +0.3 2,635,962 - DVU2524 0.79 -0.1 2,635,962 - DVU2524 0.79 -0.4 2,636,039 - -0.3 2,636,067 - +0.0 2,636,106 + +0.5 2,636,106 - -0.3 2,636,137 + -0.4 2,636,239 + hynB-2 DVU2525 0.13 -0.4 2,636,242 - hynB-2 DVU2525 0.13 +0.1 2,636,300 + hynB-2 DVU2525 0.19 +0.8 2,636,331 + hynB-2 DVU2525 0.23 -0.2 2,636,401 - hynB-2 DVU2525 0.30 -0.0 2,636,421 + hynB-2 DVU2525 0.33 -1.0 2,636,530 - hynB-2 DVU2525 0.45 -0.1 2,636,546 + hynB-2 DVU2525 0.46 -0.2 2,636,626 - hynB-2 DVU2525 0.55 -0.1 2,636,679 + hynB-2 DVU2525 0.61 +1.3 2,636,682 + hynB-2 DVU2525 0.61 +0.5 2,636,714 - hynB-2 DVU2525 0.65 -0.5 2,636,714 - hynB-2 DVU2525 0.65 +0.0 2,636,720 - hynB-2 DVU2525 0.65 +0.3 2,636,752 + hynB-2 DVU2525 0.69 -0.3 2,636,768 + hynB-2 DVU2525 0.71 -0.7 2,636,772 - hynB-2 DVU2525 0.71 -0.7 2,636,796 + hynB-2 DVU2525 0.74 -0.1 2,636,850 - hynB-2 DVU2525 0.80 +0.7 2,636,890 + hynB-2 DVU2525 0.84 -2.0 2,636,906 - hynB-2 DVU2525 0.86 -0.2 2,636,949 + +1.0 2,637,030 + -0.3 2,637,038 - -1.1 2,637,054 + +0.2
Or see this region's nucleotide sequence