Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt glyQ and DVU1899 are separated by 49 nucleotides DVU1899 and DVU1900 are separated by 2 nucleotides DVU1900 and DVU1901 are separated by 96 nucleotides
DVU1898: glyQ - glycyl-tRNA synthetase, alpha subunit (TIGR), at 1,972,583 to 1,973,452
glyQ
DVU1899: DVU1899 - DNA repair protein RecO, putative (TIGR), at 1,973,502 to 1,974,257
DVU1899
DVU1900: DVU1900 - conserved hypothetical protein (TIGR), at 1,974,260 to 1,975,201
DVU1900
DVU1901: DVU1901 - peptidyl-prolyl cis-trans isomerase domain protein (TIGR), at 1,975,298 to 1,976,233
DVU1901
Position (kb)
1974
1975
1976 Strain fitness (log2 ratio)
-1
0
1 at 1973.462 kb on - strand at 1973.508 kb on - strand at 1973.555 kb on - strand at 1973.555 kb on - strand at 1973.610 kb on - strand, within DVU1899 at 1973.617 kb on - strand, within DVU1899 at 1973.637 kb on - strand, within DVU1899 at 1973.653 kb on + strand, within DVU1899 at 1973.687 kb on + strand, within DVU1899 at 1973.749 kb on + strand, within DVU1899 at 1973.798 kb on + strand, within DVU1899 at 1973.855 kb on - strand, within DVU1899 at 1973.908 kb on - strand, within DVU1899 at 1973.912 kb on + strand, within DVU1899 at 1973.954 kb on - strand, within DVU1899 at 1974.035 kb on - strand, within DVU1899 at 1974.049 kb on + strand, within DVU1899 at 1974.115 kb on - strand, within DVU1899 at 1974.218 kb on + strand at 1974.416 kb on - strand, within DVU1900 at 1974.509 kb on + strand, within DVU1900 at 1974.542 kb on + strand, within DVU1900 at 1974.696 kb on + strand, within DVU1900 at 1974.851 kb on + strand, within DVU1900 at 1974.859 kb on - strand, within DVU1900 at 1975.016 kb on - strand, within DVU1900 at 1975.046 kb on + strand, within DVU1900 at 1975.087 kb on - strand, within DVU1900
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 1,973,462 - -0.0 1,973,508 - +0.2 1,973,555 - -0.2 1,973,555 - -0.2 1,973,610 - DVU1899 0.14 -0.2 1,973,617 - DVU1899 0.15 -0.1 1,973,637 - DVU1899 0.18 -0.2 1,973,653 + DVU1899 0.20 -0.2 1,973,687 + DVU1899 0.24 +0.4 1,973,749 + DVU1899 0.33 -0.6 1,973,798 + DVU1899 0.39 -0.4 1,973,855 - DVU1899 0.47 -0.2 1,973,908 - DVU1899 0.54 +0.0 1,973,912 + DVU1899 0.54 -1.6 1,973,954 - DVU1899 0.60 -0.3 1,974,035 - DVU1899 0.71 +1.6 1,974,049 + DVU1899 0.72 -1.1 1,974,115 - DVU1899 0.81 -0.2 1,974,218 + +0.5 1,974,416 - DVU1900 0.17 +0.1 1,974,509 + DVU1900 0.26 +0.5 1,974,542 + DVU1900 0.30 +0.2 1,974,696 + DVU1900 0.46 -0.1 1,974,851 + DVU1900 0.63 +0.2 1,974,859 - DVU1900 0.64 +0.7 1,975,016 - DVU1900 0.80 +0.7 1,975,046 + DVU1900 0.83 +0.2 1,975,087 - DVU1900 0.88 +1.5
Or see this region's nucleotide sequence