Experiment: MoYLS4 with Aluminum 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1530 and DVU1531 are separated by 125 nucleotides DVU1531 and coaD overlap by 25 nucleotides coaD and miaA overlap by 4 nucleotides
DVU1530: DVU1530 - metallo-beta-lactamase family protein (TIGR), at 1,598,015 to 1,599,625
DVU1530
DVU1531: DVU1531 - methyltransferase, putative (TIGR), at 1,599,751 to 1,600,323
DVU1531
DVU1532: coaD - pantetheine-phosphate adenylyltransferase (TIGR), at 1,600,299 to 1,600,859
coaD
DVU1533: miaA - tRNA delta(2)-isopentenylpyrophosphate transferase (TIGR), at 1,600,856 to 1,601,785
miaA
Position (kb)
1599
1600
1601 Strain fitness (log2 ratio)
-1
0
1 at 1598.785 kb on + strand, within DVU1530 at 1598.785 kb on + strand, within DVU1530 at 1598.793 kb on + strand, within DVU1530 at 1598.860 kb on + strand, within DVU1530 at 1598.860 kb on + strand, within DVU1530 at 1599.136 kb on - strand, within DVU1530 at 1599.205 kb on + strand, within DVU1530 at 1599.306 kb on - strand, within DVU1530 at 1599.390 kb on + strand, within DVU1530 at 1599.390 kb on + strand, within DVU1530 at 1599.496 kb on + strand at 1599.504 kb on - strand at 1599.544 kb on + strand at 1599.552 kb on - strand at 1600.007 kb on + strand, within DVU1531 at 1600.059 kb on + strand, within DVU1531 at 1600.177 kb on - strand, within DVU1531 at 1600.189 kb on - strand, within DVU1531 at 1600.206 kb on + strand, within DVU1531 at 1600.250 kb on + strand, within DVU1531 at 1600.258 kb on - strand, within DVU1531 at 1600.806 kb on - strand at 1600.853 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum 1mM remove 1,598,785 + DVU1530 0.48 +0.3 1,598,785 + DVU1530 0.48 -0.1 1,598,793 + DVU1530 0.48 -1.0 1,598,860 + DVU1530 0.52 +0.5 1,598,860 + DVU1530 0.52 -0.0 1,599,136 - DVU1530 0.70 +0.4 1,599,205 + DVU1530 0.74 +0.4 1,599,306 - DVU1530 0.80 -0.2 1,599,390 + DVU1530 0.85 -0.2 1,599,390 + DVU1530 0.85 -1.0 1,599,496 + -0.9 1,599,504 - +1.3 1,599,544 + -0.3 1,599,552 - -0.2 1,600,007 + DVU1531 0.45 +0.4 1,600,059 + DVU1531 0.54 +0.0 1,600,177 - DVU1531 0.74 -0.1 1,600,189 - DVU1531 0.76 +0.4 1,600,206 + DVU1531 0.79 +1.3 1,600,250 + DVU1531 0.87 -1.4 1,600,258 - DVU1531 0.88 +0.2 1,600,806 - +1.5 1,600,853 + +0.1
Or see this region's nucleotide sequence