Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2327 and SMa2329 are separated by 18 nucleotides SMa2329 and SMa2331 are separated by 2 nucleotides SMa2331 and SMa2333 are separated by 11 nucleotides
SMa2327: SMa2327 - sensor protein, at 1,297,079 to 1,299,769
SMa2327
SMa2329: SMa2329 - potassium-transporting ATPase subunit C, at 1,299,788 to 1,300,357
SMa2329
SMa2331: SMa2331 - potassium-transporting ATPase subunit B, at 1,300,360 to 1,302,402
SMa2331
SMa2333: SMa2333 - potassium-transporting ATPase subunit A, at 1,302,414 to 1,304,123
SMa2333
Position (kb)
1300
1301
1302
1303 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1299.374 kb on + strand, within SMa2327 at 1299.374 kb on + strand, within SMa2327 at 1299.375 kb on - strand, within SMa2327 at 1299.375 kb on - strand, within SMa2327 at 1299.375 kb on - strand, within SMa2327 at 1299.375 kb on - strand, within SMa2327 at 1299.375 kb on - strand, within SMa2327 at 1299.377 kb on - strand, within SMa2327 at 1299.377 kb on - strand, within SMa2327 at 1299.418 kb on + strand, within SMa2327 at 1299.425 kb on + strand, within SMa2327 at 1299.425 kb on + strand, within SMa2327 at 1299.824 kb on + strand at 1299.824 kb on + strand at 1299.825 kb on - strand at 1299.825 kb on - strand at 1299.825 kb on - strand at 1299.849 kb on - strand, within SMa2329 at 1299.849 kb on - strand, within SMa2329 at 1299.897 kb on - strand, within SMa2329 at 1299.967 kb on + strand, within SMa2329 at 1300.026 kb on - strand, within SMa2329 at 1300.026 kb on - strand, within SMa2329 at 1300.125 kb on + strand, within SMa2329 at 1300.125 kb on + strand, within SMa2329 at 1300.126 kb on - strand, within SMa2329 at 1300.126 kb on - strand, within SMa2329 at 1300.165 kb on - strand at 1300.165 kb on - strand, within SMa2329 at 1300.314 kb on - strand at 1300.439 kb on + strand at 1300.487 kb on + strand at 1300.587 kb on + strand, within SMa2331 at 1300.587 kb on + strand, within SMa2331 at 1300.593 kb on + strand, within SMa2331 at 1300.594 kb on - strand, within SMa2331 at 1300.594 kb on - strand, within SMa2331 at 1300.866 kb on + strand, within SMa2331 at 1300.866 kb on + strand, within SMa2331 at 1300.866 kb on + strand, within SMa2331 at 1300.867 kb on - strand, within SMa2331 at 1300.867 kb on - strand, within SMa2331 at 1300.867 kb on - strand, within SMa2331 at 1300.905 kb on - strand, within SMa2331 at 1301.006 kb on - strand, within SMa2331 at 1301.673 kb on + strand, within SMa2331 at 1301.674 kb on - strand, within SMa2331 at 1301.928 kb on + strand, within SMa2331 at 1301.962 kb on + strand, within SMa2331 at 1301.962 kb on + strand, within SMa2331 at 1301.962 kb on + strand, within SMa2331 at 1301.963 kb on - strand, within SMa2331 at 1302.184 kb on + strand, within SMa2331 at 1302.185 kb on - strand, within SMa2331 at 1302.358 kb on + strand at 1302.540 kb on - strand at 1302.623 kb on - strand, within SMa2333 at 1302.662 kb on + strand, within SMa2333 at 1302.662 kb on + strand, within SMa2333 at 1302.663 kb on - strand, within SMa2333 at 1302.663 kb on - strand, within SMa2333 at 1302.667 kb on + strand, within SMa2333 at 1302.729 kb on - strand, within SMa2333 at 1302.729 kb on - strand, within SMa2333 at 1302.729 kb on - strand, within SMa2333 at 1302.730 kb on + strand, within SMa2333 at 1302.730 kb on + strand, within SMa2333 at 1302.730 kb on + strand, within SMa2333 at 1302.731 kb on - strand, within SMa2333 at 1302.731 kb on - strand, within SMa2333 at 1302.731 kb on - strand, within SMa2333 at 1302.736 kb on + strand, within SMa2333 at 1302.737 kb on - strand, within SMa2333 at 1302.737 kb on - strand, within SMa2333 at 1302.862 kb on + strand, within SMa2333 at 1302.920 kb on + strand, within SMa2333 at 1303.012 kb on - strand, within SMa2333 at 1303.170 kb on + strand, within SMa2333 at 1303.171 kb on - strand, within SMa2333 at 1303.216 kb on + strand, within SMa2333 at 1303.249 kb on + strand, within SMa2333 at 1303.249 kb on + strand, within SMa2333 at 1303.250 kb on - strand, within SMa2333 at 1303.309 kb on + strand, within SMa2333 at 1303.310 kb on - strand, within SMa2333 at 1303.346 kb on + strand, within SMa2333 at 1303.347 kb on - strand, within SMa2333 at 1303.355 kb on - strand, within SMa2333
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 1,299,374 + SMa2327 0.85 -0.5 1,299,374 + SMa2327 0.85 +1.1 1,299,375 - SMa2327 0.85 -0.3 1,299,375 - SMa2327 0.85 +0.1 1,299,375 - SMa2327 0.85 +2.4 1,299,375 - SMa2327 0.85 -0.1 1,299,375 - SMa2327 0.85 -0.1 1,299,377 - SMa2327 0.85 -0.3 1,299,377 - SMa2327 0.85 -0.6 1,299,418 + SMa2327 0.87 -1.4 1,299,425 + SMa2327 0.87 -1.0 1,299,425 + SMa2327 0.87 +0.6 1,299,824 + -1.5 1,299,824 + -2.2 1,299,825 - +1.8 1,299,825 - -1.7 1,299,825 - +0.1 1,299,849 - SMa2329 0.11 +0.2 1,299,849 - SMa2329 0.11 +2.1 1,299,897 - SMa2329 0.19 +2.6 1,299,967 + SMa2329 0.31 -0.9 1,300,026 - SMa2329 0.42 -0.4 1,300,026 - SMa2329 0.42 -1.1 1,300,125 + SMa2329 0.59 -1.3 1,300,125 + SMa2329 0.59 -0.6 1,300,126 - SMa2329 0.59 -0.6 1,300,126 - SMa2329 0.59 +0.7 1,300,165 - +0.1 1,300,165 - SMa2329 0.66 -0.6 1,300,314 - -0.3 1,300,439 + -0.7 1,300,487 + -1.5 1,300,587 + SMa2331 0.11 +1.7 1,300,587 + SMa2331 0.11 -0.4 1,300,593 + SMa2331 0.11 -2.9 1,300,594 - SMa2331 0.11 -1.5 1,300,594 - SMa2331 0.11 -2.4 1,300,866 + SMa2331 0.25 -0.6 1,300,866 + SMa2331 0.25 -1.5 1,300,866 + SMa2331 0.25 -0.3 1,300,867 - SMa2331 0.25 +1.3 1,300,867 - SMa2331 0.25 -0.3 1,300,867 - SMa2331 0.25 +0.6 1,300,905 - SMa2331 0.27 +0.7 1,301,006 - SMa2331 0.32 -0.2 1,301,673 + SMa2331 0.64 +0.2 1,301,674 - SMa2331 0.64 +0.8 1,301,928 + SMa2331 0.77 +2.4 1,301,962 + SMa2331 0.78 +0.1 1,301,962 + SMa2331 0.78 +0.3 1,301,962 + SMa2331 0.78 -0.3 1,301,963 - SMa2331 0.78 +0.6 1,302,184 + SMa2331 0.89 -0.1 1,302,185 - SMa2331 0.89 -0.7 1,302,358 + +1.0 1,302,540 - -0.1 1,302,623 - SMa2333 0.12 -0.5 1,302,662 + SMa2333 0.15 +0.0 1,302,662 + SMa2333 0.15 -0.1 1,302,663 - SMa2333 0.15 -0.3 1,302,663 - SMa2333 0.15 -0.5 1,302,667 + SMa2333 0.15 -0.8 1,302,729 - SMa2333 0.18 -2.2 1,302,729 - SMa2333 0.18 +0.6 1,302,729 - SMa2333 0.18 -0.2 1,302,730 + SMa2333 0.18 -0.0 1,302,730 + SMa2333 0.18 +0.4 1,302,730 + SMa2333 0.18 -1.0 1,302,731 - SMa2333 0.19 -1.2 1,302,731 - SMa2333 0.19 -0.3 1,302,731 - SMa2333 0.19 +0.6 1,302,736 + SMa2333 0.19 -1.5 1,302,737 - SMa2333 0.19 -0.3 1,302,737 - SMa2333 0.19 +0.5 1,302,862 + SMa2333 0.26 +1.9 1,302,920 + SMa2333 0.30 -0.3 1,303,012 - SMa2333 0.35 +0.3 1,303,170 + SMa2333 0.44 +0.4 1,303,171 - SMa2333 0.44 +0.1 1,303,216 + SMa2333 0.47 -1.0 1,303,249 + SMa2333 0.49 +0.1 1,303,249 + SMa2333 0.49 -1.4 1,303,250 - SMa2333 0.49 -1.3 1,303,309 + SMa2333 0.52 -1.5 1,303,310 - SMa2333 0.52 +0.5 1,303,346 + SMa2333 0.55 +1.1 1,303,347 - SMa2333 0.55 -0.5 1,303,355 - SMa2333 0.55 -0.8
Or see this region's nucleotide sequence