Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
SMa1635: SMa1635 - hypothetical protein, at 910,181 to 910,639
SMa1635
Position (kb)
910
911 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 909.212 kb on + strand at 909.411 kb on + strand at 909.411 kb on + strand at 909.412 kb on - strand at 909.412 kb on - strand at 909.413 kb on + strand at 909.413 kb on + strand at 909.413 kb on + strand at 909.414 kb on - strand at 909.414 kb on - strand at 909.419 kb on - strand at 909.535 kb on + strand at 909.597 kb on + strand at 909.612 kb on + strand at 909.613 kb on - strand at 909.733 kb on + strand at 909.734 kb on - strand at 909.735 kb on + strand at 909.735 kb on + strand at 909.735 kb on + strand at 909.736 kb on - strand at 909.926 kb on + strand at 909.927 kb on - strand at 909.927 kb on - strand at 909.977 kb on + strand at 909.978 kb on - strand at 909.978 kb on - strand at 909.978 kb on - strand at 910.002 kb on + strand at 910.094 kb on - strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.095 kb on + strand at 910.096 kb on - strand at 910.187 kb on + strand at 910.330 kb on + strand, within SMa1635 at 910.927 kb on + strand at 911.056 kb on + strand at 911.069 kb on - strand at 911.089 kb on + strand at 911.115 kb on - strand at 911.141 kb on - strand at 911.172 kb on + strand at 911.217 kb on + strand at 911.217 kb on + strand at 911.217 kb on + strand at 911.218 kb on - strand at 911.218 kb on - strand at 911.246 kb on - strand at 911.255 kb on + strand at 911.256 kb on - strand at 911.279 kb on + strand at 911.389 kb on + strand at 911.390 kb on - strand at 911.397 kb on + strand at 911.398 kb on - strand at 911.408 kb on - strand at 911.534 kb on - strand at 911.619 kb on - strand at 911.620 kb on + strand at 911.620 kb on + strand at 911.621 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 909,212 + -1.0 909,411 + -0.0 909,411 + +1.0 909,412 - +0.5 909,412 - +0.3 909,413 + -0.2 909,413 + -1.3 909,413 + -0.5 909,414 - +0.0 909,414 - +2.9 909,419 - -0.5 909,535 + -0.2 909,597 + -0.3 909,612 + -0.4 909,613 - -0.2 909,733 + +0.3 909,734 - -0.1 909,735 + +0.1 909,735 + -0.3 909,735 + +0.1 909,736 - -1.1 909,926 + -1.3 909,927 - +1.1 909,927 - -0.7 909,977 + +0.1 909,978 - +0.4 909,978 - -0.1 909,978 - +1.3 910,002 + +1.1 910,094 - -0.6 910,095 + +0.1 910,095 + +0.1 910,095 + +0.2 910,095 + -1.7 910,096 - +0.0 910,187 + +0.6 910,330 + SMa1635 0.32 -3.0 910,927 + -1.1 911,056 + -0.0 911,069 - +0.1 911,089 + -0.7 911,115 - -0.2 911,141 - +2.8 911,172 + +1.4 911,217 + -1.1 911,217 + +0.6 911,217 + +0.4 911,218 - +0.1 911,218 - -0.5 911,246 - +0.3 911,255 + -0.4 911,256 - +0.7 911,279 + -0.2 911,389 + -0.1 911,390 - +0.2 911,397 + -0.9 911,398 - -0.1 911,408 - -2.1 911,534 - +1.7 911,619 - +0.7 911,620 + -0.0 911,620 + -0.8 911,621 - -0.1
Or see this region's nucleotide sequence