Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21383 and SM_b21384 are separated by 103 nucleotides SM_b21384 and SM_b21385 are separated by 234 nucleotides
SM_b21383: SM_b21383 - SDR family dehydrogenase, at 1,046,369 to 1,047,259
_b21383
SM_b21384: SM_b21384 - SDR family dehydrogenase, at 1,047,363 to 1,048,106
_b21384
SM_b21385: SM_b21385 - AraC family transcriptional regulator, at 1,048,341 to 1,049,276
_b21385
Position (kb)
1047
1048
1049 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1046.370 kb on + strand at 1046.370 kb on + strand at 1046.370 kb on + strand at 1046.392 kb on - strand at 1046.392 kb on - strand at 1046.393 kb on + strand at 1046.393 kb on + strand at 1046.394 kb on - strand at 1046.620 kb on - strand, within SM_b21383 at 1046.650 kb on - strand, within SM_b21383 at 1046.659 kb on - strand, within SM_b21383 at 1046.681 kb on - strand, within SM_b21383 at 1046.703 kb on - strand, within SM_b21383 at 1046.936 kb on - strand, within SM_b21383 at 1047.005 kb on + strand, within SM_b21383 at 1047.032 kb on + strand, within SM_b21383 at 1047.033 kb on - strand, within SM_b21383 at 1047.033 kb on - strand, within SM_b21383 at 1047.056 kb on + strand, within SM_b21383 at 1047.056 kb on + strand, within SM_b21383 at 1047.057 kb on - strand, within SM_b21383 at 1047.057 kb on - strand, within SM_b21383 at 1047.227 kb on - strand at 1047.515 kb on + strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.516 kb on - strand, within SM_b21384 at 1047.517 kb on + strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.518 kb on - strand, within SM_b21384 at 1047.530 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.625 kb on + strand, within SM_b21384 at 1047.626 kb on - strand, within SM_b21384 at 1047.655 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.674 kb on + strand, within SM_b21384 at 1047.675 kb on - strand, within SM_b21384 at 1047.779 kb on + strand, within SM_b21384 at 1047.854 kb on + strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.855 kb on - strand, within SM_b21384 at 1047.864 kb on + strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1047.950 kb on - strand, within SM_b21384 at 1048.006 kb on - strand, within SM_b21384 at 1048.127 kb on - strand at 1048.151 kb on + strand at 1048.151 kb on + strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.152 kb on - strand at 1048.261 kb on + strand at 1048.309 kb on + strand at 1048.310 kb on - strand at 1048.371 kb on + strand at 1048.371 kb on + strand at 1048.371 kb on + strand at 1048.372 kb on - strand at 1048.372 kb on - strand at 1048.412 kb on + strand at 1048.413 kb on - strand at 1048.413 kb on - strand at 1048.463 kb on - strand, within SM_b21385 at 1048.463 kb on - strand, within SM_b21385 at 1048.463 kb on - strand, within SM_b21385 at 1048.473 kb on + strand, within SM_b21385 at 1048.519 kb on + strand, within SM_b21385 at 1048.519 kb on + strand, within SM_b21385 at 1048.520 kb on - strand, within SM_b21385 at 1048.541 kb on - strand, within SM_b21385 at 1048.541 kb on - strand, within SM_b21385 at 1048.545 kb on + strand, within SM_b21385 at 1048.545 kb on + strand, within SM_b21385 at 1048.546 kb on - strand, within SM_b21385 at 1048.623 kb on + strand, within SM_b21385 at 1048.623 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.688 kb on + strand, within SM_b21385 at 1048.839 kb on + strand, within SM_b21385 at 1048.840 kb on - strand, within SM_b21385 at 1048.840 kb on - strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.899 kb on + strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.900 kb on - strand, within SM_b21385 at 1048.945 kb on - strand, within SM_b21385 at 1048.945 kb on - strand, within SM_b21385 at 1049.050 kb on - strand, within SM_b21385
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 1,046,370 + -0.8 1,046,370 + +0.6 1,046,370 + +0.3 1,046,392 - -0.0 1,046,392 - -0.2 1,046,393 + +0.1 1,046,393 + -0.9 1,046,394 - +0.3 1,046,620 - SM_b21383 0.28 +0.1 1,046,650 - SM_b21383 0.32 +0.7 1,046,659 - SM_b21383 0.33 +0.0 1,046,681 - SM_b21383 0.35 -0.3 1,046,703 - SM_b21383 0.37 -1.3 1,046,936 - SM_b21383 0.64 -0.7 1,047,005 + SM_b21383 0.71 +0.3 1,047,032 + SM_b21383 0.74 -0.2 1,047,033 - SM_b21383 0.75 -0.3 1,047,033 - SM_b21383 0.75 +0.4 1,047,056 + SM_b21383 0.77 -0.4 1,047,056 + SM_b21383 0.77 -0.1 1,047,057 - SM_b21383 0.77 +1.5 1,047,057 - SM_b21383 0.77 -0.3 1,047,227 - +0.1 1,047,515 + SM_b21384 0.20 +0.1 1,047,516 - SM_b21384 0.21 -0.6 1,047,516 - SM_b21384 0.21 +0.7 1,047,516 - SM_b21384 0.21 -1.8 1,047,517 + SM_b21384 0.21 +0.2 1,047,518 - SM_b21384 0.21 +0.3 1,047,518 - SM_b21384 0.21 -0.4 1,047,530 + SM_b21384 0.22 +0.3 1,047,625 + SM_b21384 0.35 -0.1 1,047,625 + SM_b21384 0.35 +0.1 1,047,625 + SM_b21384 0.35 +0.2 1,047,625 + SM_b21384 0.35 +0.5 1,047,626 - SM_b21384 0.35 +1.8 1,047,655 + SM_b21384 0.39 -0.6 1,047,674 + SM_b21384 0.42 +0.3 1,047,674 + SM_b21384 0.42 +1.2 1,047,675 - SM_b21384 0.42 +0.2 1,047,779 + SM_b21384 0.56 +1.2 1,047,854 + SM_b21384 0.66 +0.4 1,047,855 - SM_b21384 0.66 -2.9 1,047,855 - SM_b21384 0.66 +0.6 1,047,864 + SM_b21384 0.67 +0.3 1,047,950 - SM_b21384 0.79 +0.7 1,047,950 - SM_b21384 0.79 -0.4 1,048,006 - SM_b21384 0.86 -0.7 1,048,127 - -0.6 1,048,151 + +0.3 1,048,151 + +2.3 1,048,152 - +1.2 1,048,152 - -1.5 1,048,152 - +0.1 1,048,152 - +0.3 1,048,261 + +0.3 1,048,309 + +0.4 1,048,310 - -1.3 1,048,371 + +1.4 1,048,371 + -1.4 1,048,371 + +1.3 1,048,372 - +1.0 1,048,372 - +1.0 1,048,412 + -1.5 1,048,413 - +0.6 1,048,413 - +1.1 1,048,463 - SM_b21385 0.13 -2.1 1,048,463 - SM_b21385 0.13 +1.7 1,048,463 - SM_b21385 0.13 -0.3 1,048,473 + SM_b21385 0.14 +0.9 1,048,519 + SM_b21385 0.19 -0.3 1,048,519 + SM_b21385 0.19 -2.4 1,048,520 - SM_b21385 0.19 -0.4 1,048,541 - SM_b21385 0.21 +0.1 1,048,541 - SM_b21385 0.21 -1.9 1,048,545 + SM_b21385 0.22 -0.5 1,048,545 + SM_b21385 0.22 +0.3 1,048,546 - SM_b21385 0.22 +0.2 1,048,623 + SM_b21385 0.30 +0.3 1,048,623 + SM_b21385 0.30 -0.7 1,048,688 + SM_b21385 0.37 -0.2 1,048,688 + SM_b21385 0.37 -0.2 1,048,688 + SM_b21385 0.37 +0.6 1,048,839 + SM_b21385 0.53 +0.4 1,048,840 - SM_b21385 0.53 +0.9 1,048,840 - SM_b21385 0.53 +0.3 1,048,899 + SM_b21385 0.60 -1.4 1,048,899 + SM_b21385 0.60 +0.0 1,048,899 + SM_b21385 0.60 -1.8 1,048,899 + SM_b21385 0.60 +0.7 1,048,900 - SM_b21385 0.60 -0.1 1,048,900 - SM_b21385 0.60 +0.5 1,048,900 - SM_b21385 0.60 -1.9 1,048,945 - SM_b21385 0.65 +0.3 1,048,945 - SM_b21385 0.65 -0.4 1,049,050 - SM_b21385 0.76 +0.4
Or see this region's nucleotide sequence