Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21249 and SM_b21250 are separated by 410 nucleotides SM_b21250 and SM_b21251 are separated by 105 nucleotides
SM_b21249: SM_b21249 - sulfotransferase, at 817,644 to 818,486
_b21249
SM_b21250: SM_b21250 - glycosyltransferase, at 818,897 to 820,180
_b21250
SM_b21251: SM_b21251 - hypothetical protein, at 820,286 to 822,502
_b21251
Position (kb) 818
819
820
821 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 818.020 kb on + strand, within SM_b21249 at 818.021 kb on - strand, within SM_b21249 at 818.040 kb on - strand, within SM_b21249 at 818.059 kb on - strand, within SM_b21249 at 818.113 kb on + strand, within SM_b21249 at 818.114 kb on - strand, within SM_b21249 at 818.145 kb on + strand, within SM_b21249 at 818.145 kb on + strand, within SM_b21249 at 818.146 kb on - strand, within SM_b21249 at 818.287 kb on - strand, within SM_b21249 at 818.303 kb on + strand, within SM_b21249 at 818.304 kb on - strand, within SM_b21249 at 818.304 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.362 kb on + strand, within SM_b21249 at 818.363 kb on - strand, within SM_b21249 at 818.393 kb on - strand, within SM_b21249 at 818.432 kb on + strand at 818.440 kb on - strand at 818.534 kb on + strand at 818.576 kb on - strand at 818.695 kb on + strand at 818.695 kb on + strand at 818.695 kb on + strand at 818.792 kb on + strand at 818.827 kb on - strand at 819.018 kb on - strand at 819.018 kb on - strand at 819.031 kb on + strand, within SM_b21250 at 819.032 kb on - strand, within SM_b21250 at 819.032 kb on - strand, within SM_b21250 at 819.176 kb on + strand, within SM_b21250 at 819.456 kb on + strand, within SM_b21250 at 819.456 kb on + strand, within SM_b21250 at 819.457 kb on - strand, within SM_b21250 at 819.457 kb on - strand, within SM_b21250 at 819.458 kb on + strand, within SM_b21250 at 819.458 kb on + strand, within SM_b21250 at 819.530 kb on - strand, within SM_b21250 at 819.595 kb on + strand, within SM_b21250 at 819.595 kb on + strand, within SM_b21250 at 819.596 kb on - strand, within SM_b21250 at 819.828 kb on + strand, within SM_b21250 at 819.829 kb on - strand, within SM_b21250 at 820.067 kb on + strand at 820.068 kb on - strand at 820.084 kb on - strand at 820.190 kb on + strand at 820.325 kb on + strand at 820.325 kb on + strand at 820.325 kb on + strand at 820.326 kb on - strand at 820.326 kb on - strand at 820.326 kb on - strand at 820.326 kb on - strand at 820.326 kb on - strand at 820.336 kb on - strand at 820.343 kb on + strand at 820.395 kb on + strand at 820.395 kb on + strand at 820.396 kb on - strand at 820.396 kb on - strand at 820.396 kb on - strand at 820.876 kb on - strand, within SM_b21251 at 821.023 kb on - strand, within SM_b21251 at 821.072 kb on + strand, within SM_b21251 at 821.072 kb on + strand, within SM_b21251 at 821.072 kb on + strand, within SM_b21251 at 821.073 kb on - strand, within SM_b21251 at 821.073 kb on - strand, within SM_b21251 at 821.077 kb on - strand, within SM_b21251 at 821.077 kb on - strand, within SM_b21251 at 821.165 kb on - strand, within SM_b21251 at 821.165 kb on - strand, within SM_b21251
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 818,020 + SM_b21249 0.45 -0.1 818,021 - SM_b21249 0.45 +1.2 818,040 - SM_b21249 0.47 +0.4 818,059 - SM_b21249 0.49 -2.5 818,113 + SM_b21249 0.56 +0.5 818,114 - SM_b21249 0.56 +1.6 818,145 + SM_b21249 0.59 +3.6 818,145 + SM_b21249 0.59 +0.1 818,146 - SM_b21249 0.60 +1.3 818,287 - SM_b21249 0.76 -0.3 818,303 + SM_b21249 0.78 -0.0 818,304 - SM_b21249 0.78 -0.1 818,304 - SM_b21249 0.78 -0.3 818,314 - SM_b21249 0.79 +0.2 818,314 - SM_b21249 0.79 -0.0 818,314 - SM_b21249 0.79 -0.1 818,362 + SM_b21249 0.85 +0.3 818,363 - SM_b21249 0.85 -1.1 818,393 - SM_b21249 0.89 +0.2 818,432 + -0.6 818,440 - -0.3 818,534 + +0.4 818,576 - -0.6 818,695 + +0.3 818,695 + +0.6 818,695 + -3.7 818,792 + -0.4 818,827 - +1.4 819,018 - +0.7 819,018 - +0.5 819,031 + SM_b21250 0.10 +0.4 819,032 - SM_b21250 0.11 +0.3 819,032 - SM_b21250 0.11 +0.5 819,176 + SM_b21250 0.22 +0.5 819,456 + SM_b21250 0.44 -0.1 819,456 + SM_b21250 0.44 -0.2 819,457 - SM_b21250 0.44 +0.3 819,457 - SM_b21250 0.44 -1.8 819,458 + SM_b21250 0.44 +0.3 819,458 + SM_b21250 0.44 +0.2 819,530 - SM_b21250 0.49 +3.0 819,595 + SM_b21250 0.54 +0.1 819,595 + SM_b21250 0.54 +0.7 819,596 - SM_b21250 0.54 -0.0 819,828 + SM_b21250 0.73 +1.3 819,829 - SM_b21250 0.73 +0.5 820,067 + +0.7 820,068 - -0.6 820,084 - +0.3 820,190 + +0.5 820,325 + -0.2 820,325 + -1.9 820,325 + +2.0 820,326 - +0.7 820,326 - -0.0 820,326 - -0.1 820,326 - +1.4 820,326 - +0.4 820,336 - -0.8 820,343 + -0.7 820,395 + -3.3 820,395 + -0.1 820,396 - +1.5 820,396 - +1.1 820,396 - -0.3 820,876 - SM_b21251 0.27 +1.0 821,023 - SM_b21251 0.33 -0.4 821,072 + SM_b21251 0.35 +1.6 821,072 + SM_b21251 0.35 +0.4 821,072 + SM_b21251 0.35 -0.0 821,073 - SM_b21251 0.35 -0.1 821,073 - SM_b21251 0.35 -1.0 821,077 - SM_b21251 0.36 +0.3 821,077 - SM_b21251 0.36 +0.1 821,165 - SM_b21251 0.40 -0.6 821,165 - SM_b21251 0.40 -0.5
Or see this region's nucleotide sequence