Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21248 and SM_b21249 are separated by 31 nucleotides SM_b21249 and SM_b21250 are separated by 410 nucleotides
SM_b21248: SM_b21248 - aminotransferase, at 816,422 to 817,612
_b21248
SM_b21249: SM_b21249 - sulfotransferase, at 817,644 to 818,486
_b21249
SM_b21250: SM_b21250 - glycosyltransferase, at 818,897 to 820,180
_b21250
Position (kb) 817
818
819 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 816.754 kb on - strand, within SM_b21248 at 816.832 kb on - strand, within SM_b21248 at 816.867 kb on + strand, within SM_b21248 at 816.867 kb on + strand, within SM_b21248 at 817.055 kb on + strand, within SM_b21248 at 817.055 kb on + strand, within SM_b21248 at 817.056 kb on - strand, within SM_b21248 at 817.056 kb on - strand, within SM_b21248 at 817.068 kb on - strand, within SM_b21248 at 817.194 kb on + strand, within SM_b21248 at 817.194 kb on + strand, within SM_b21248 at 817.194 kb on + strand, within SM_b21248 at 817.194 kb on + strand, within SM_b21248 at 817.194 kb on + strand, within SM_b21248 at 817.195 kb on - strand, within SM_b21248 at 817.195 kb on - strand, within SM_b21248 at 817.213 kb on + strand, within SM_b21248 at 817.213 kb on + strand, within SM_b21248 at 817.216 kb on + strand, within SM_b21248 at 817.216 kb on + strand, within SM_b21248 at 817.298 kb on + strand, within SM_b21248 at 817.299 kb on - strand, within SM_b21248 at 817.299 kb on - strand, within SM_b21248 at 817.301 kb on - strand, within SM_b21248 at 817.301 kb on - strand, within SM_b21248 at 817.427 kb on - strand, within SM_b21248 at 817.610 kb on + strand at 817.744 kb on + strand, within SM_b21249 at 817.745 kb on - strand, within SM_b21249 at 817.831 kb on - strand, within SM_b21249 at 818.020 kb on + strand, within SM_b21249 at 818.021 kb on - strand, within SM_b21249 at 818.040 kb on - strand, within SM_b21249 at 818.059 kb on - strand, within SM_b21249 at 818.113 kb on + strand, within SM_b21249 at 818.114 kb on - strand, within SM_b21249 at 818.145 kb on + strand, within SM_b21249 at 818.145 kb on + strand, within SM_b21249 at 818.146 kb on - strand, within SM_b21249 at 818.287 kb on - strand, within SM_b21249 at 818.303 kb on + strand, within SM_b21249 at 818.304 kb on - strand, within SM_b21249 at 818.304 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.314 kb on - strand, within SM_b21249 at 818.362 kb on + strand, within SM_b21249 at 818.363 kb on - strand, within SM_b21249 at 818.393 kb on - strand, within SM_b21249 at 818.432 kb on + strand at 818.440 kb on - strand at 818.534 kb on + strand at 818.576 kb on - strand at 818.695 kb on + strand at 818.695 kb on + strand at 818.695 kb on + strand at 818.792 kb on + strand at 818.827 kb on - strand at 819.018 kb on - strand at 819.018 kb on - strand at 819.031 kb on + strand, within SM_b21250 at 819.032 kb on - strand, within SM_b21250 at 819.032 kb on - strand, within SM_b21250 at 819.176 kb on + strand, within SM_b21250 at 819.456 kb on + strand, within SM_b21250 at 819.456 kb on + strand, within SM_b21250 at 819.457 kb on - strand, within SM_b21250 at 819.457 kb on - strand, within SM_b21250 at 819.458 kb on + strand, within SM_b21250 at 819.458 kb on + strand, within SM_b21250
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 816,754 - SM_b21248 0.28 -0.4 816,832 - SM_b21248 0.34 -1.4 816,867 + SM_b21248 0.37 -0.3 816,867 + SM_b21248 0.37 +0.1 817,055 + SM_b21248 0.53 +0.9 817,055 + SM_b21248 0.53 -0.1 817,056 - SM_b21248 0.53 -0.5 817,056 - SM_b21248 0.53 -0.6 817,068 - SM_b21248 0.54 -0.1 817,194 + SM_b21248 0.65 +2.7 817,194 + SM_b21248 0.65 -2.7 817,194 + SM_b21248 0.65 -0.2 817,194 + SM_b21248 0.65 +0.8 817,194 + SM_b21248 0.65 +1.1 817,195 - SM_b21248 0.65 +0.1 817,195 - SM_b21248 0.65 +0.3 817,213 + SM_b21248 0.66 -0.0 817,213 + SM_b21248 0.66 -0.3 817,216 + SM_b21248 0.67 +0.8 817,216 + SM_b21248 0.67 -1.8 817,298 + SM_b21248 0.74 -0.3 817,299 - SM_b21248 0.74 -0.1 817,299 - SM_b21248 0.74 -0.0 817,301 - SM_b21248 0.74 -1.2 817,301 - SM_b21248 0.74 -0.1 817,427 - SM_b21248 0.84 -2.8 817,610 + +1.6 817,744 + SM_b21249 0.12 -1.0 817,745 - SM_b21249 0.12 +0.0 817,831 - SM_b21249 0.22 +0.7 818,020 + SM_b21249 0.45 -0.1 818,021 - SM_b21249 0.45 +1.2 818,040 - SM_b21249 0.47 +0.4 818,059 - SM_b21249 0.49 -2.5 818,113 + SM_b21249 0.56 +0.5 818,114 - SM_b21249 0.56 +1.6 818,145 + SM_b21249 0.59 +3.6 818,145 + SM_b21249 0.59 +0.1 818,146 - SM_b21249 0.60 +1.3 818,287 - SM_b21249 0.76 -0.3 818,303 + SM_b21249 0.78 -0.0 818,304 - SM_b21249 0.78 -0.1 818,304 - SM_b21249 0.78 -0.3 818,314 - SM_b21249 0.79 +0.2 818,314 - SM_b21249 0.79 -0.0 818,314 - SM_b21249 0.79 -0.1 818,362 + SM_b21249 0.85 +0.3 818,363 - SM_b21249 0.85 -1.1 818,393 - SM_b21249 0.89 +0.2 818,432 + -0.6 818,440 - -0.3 818,534 + +0.4 818,576 - -0.6 818,695 + +0.3 818,695 + +0.6 818,695 + -3.7 818,792 + -0.4 818,827 - +1.4 819,018 - +0.7 819,018 - +0.5 819,031 + SM_b21250 0.10 +0.4 819,032 - SM_b21250 0.11 +0.3 819,032 - SM_b21250 0.11 +0.5 819,176 + SM_b21250 0.22 +0.5 819,456 + SM_b21250 0.44 -0.1 819,456 + SM_b21250 0.44 -0.2 819,457 - SM_b21250 0.44 +0.3 819,457 - SM_b21250 0.44 -1.8 819,458 + SM_b21250 0.44 +0.3 819,458 + SM_b21250 0.44 +0.2
Or see this region's nucleotide sequence