Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21085 and SM_b21086 are separated by 425 nucleotides SM_b21086 and SM_b21087 are separated by 144 nucleotides
SM_b21085: SM_b21085 - hypothetical protein, at 723,280 to 724,932
_b21085
SM_b21086: SM_b21086 - hypothetical protein, at 725,358 to 725,834
_b21086
SM_b21087: SM_b21087 - conjugal transfer protein, at 725,979 to 730,598
_b21087
Position (kb) 725
726 Strain fitness (log2 ratio) -2
-1
0
1
2 at 725.064 kb on + strand at 725.122 kb on + strand at 725.122 kb on + strand at 725.123 kb on - strand at 725.123 kb on - strand at 725.125 kb on + strand at 725.125 kb on + strand at 725.125 kb on + strand at 725.126 kb on - strand at 725.126 kb on - strand at 725.167 kb on - strand at 725.230 kb on + strand at 725.231 kb on - strand at 725.231 kb on - strand at 725.354 kb on + strand at 725.354 kb on + strand at 725.354 kb on + strand at 725.355 kb on - strand at 725.375 kb on - strand at 725.375 kb on - strand at 725.412 kb on + strand, within SM_b21086 at 725.412 kb on + strand, within SM_b21086 at 725.412 kb on + strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.413 kb on - strand, within SM_b21086 at 725.451 kb on + strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.452 kb on - strand, within SM_b21086 at 725.492 kb on - strand, within SM_b21086 at 725.496 kb on - strand, within SM_b21086 at 725.496 kb on - strand, within SM_b21086 at 725.506 kb on - strand, within SM_b21086 at 725.543 kb on - strand, within SM_b21086 at 725.543 kb on - strand, within SM_b21086 at 725.550 kb on + strand, within SM_b21086 at 725.550 kb on + strand, within SM_b21086 at 725.802 kb on + strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.803 kb on - strand at 725.823 kb on + strand at 725.827 kb on + strand at 725.854 kb on - strand at 725.877 kb on - strand at 725.937 kb on - strand at 725.937 kb on - strand at 726.102 kb on + strand at 726.381 kb on + strand at 726.381 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 725,064 + +0.3 725,122 + +0.8 725,122 + +0.2 725,123 - +0.9 725,123 - +0.1 725,125 + -0.8 725,125 + +0.6 725,125 + +0.2 725,126 - +0.1 725,126 - +1.0 725,167 - +0.2 725,230 + -0.1 725,231 - -0.3 725,231 - -0.4 725,354 + +0.3 725,354 + -0.4 725,354 + +0.0 725,355 - -0.6 725,375 - -2.0 725,375 - -0.2 725,412 + SM_b21086 0.11 -0.3 725,412 + SM_b21086 0.11 -0.2 725,412 + SM_b21086 0.11 -0.4 725,413 - SM_b21086 0.12 +0.0 725,413 - SM_b21086 0.12 -0.8 725,413 - SM_b21086 0.12 +0.2 725,451 + SM_b21086 0.19 +0.0 725,452 - SM_b21086 0.20 -0.5 725,452 - SM_b21086 0.20 -0.8 725,452 - SM_b21086 0.20 -0.7 725,492 - SM_b21086 0.28 -0.7 725,496 - SM_b21086 0.29 -0.1 725,496 - SM_b21086 0.29 +2.5 725,506 - SM_b21086 0.31 -0.0 725,543 - SM_b21086 0.39 +0.1 725,543 - SM_b21086 0.39 -0.4 725,550 + SM_b21086 0.40 -0.0 725,550 + SM_b21086 0.40 +1.2 725,802 + -2.7 725,803 - -0.2 725,803 - -0.3 725,803 - -0.3 725,803 - -0.9 725,803 - -0.5 725,823 + +0.0 725,827 + -0.1 725,854 - -0.4 725,877 - +1.4 725,937 - -0.8 725,937 - +0.1 726,102 + -0.7 726,381 + -1.2 726,381 + +0.5
Or see this region's nucleotide sequence